Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CiitaP79621 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CiitaP79621 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CiitaP79621 Gm43392-201ENSMUST00000196560 434 ntBASIC6.86□□□□□ -1.31
CiitaP79621 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CiitaP79621 Gm18290-201ENSMUST00000202900 844 ntBASIC6.86□□□□□ -1.31
CiitaP79621 Gm44162-201ENSMUST00000203543 544 ntBASIC6.86□□□□□ -1.31
CiitaP79621 Gm18851-201ENSMUST00000210087 1058 ntBASIC6.86□□□□□ -1.31
CiitaP79621 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.86□□□□□ -1.31
CiitaP79621 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.86□□□□□ -1.31
CiitaP79621 Gm45574-201ENSMUST00000210921 331 ntBASIC6.86□□□□□ -1.31
CiitaP79621 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC6.86□□□□□ -1.31
CiitaP79621 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC6.86□□□□□ -1.31
CiitaP79621 Gm7557-201ENSMUST00000221935 865 ntBASIC6.86□□□□□ -1.31
CiitaP79621 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.86□□□□□ -1.31
CiitaP79621 Cma2-202ENSMUST00000228263 857 ntBASIC6.86□□□□□ -1.31
CiitaP79621 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CiitaP79621 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CiitaP79621 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CiitaP79621 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.86□□□□□ -1.31
CiitaP79621 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
CiitaP79621 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
CiitaP79621 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CiitaP79621 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.86□□□□□ -1.31
CiitaP79621 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.86□□□□□ -1.31
CiitaP79621 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CiitaP79621 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.86□□□□□ -1.31
CiitaP79621 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
CiitaP79621 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CiitaP79621 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CiitaP79621 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CiitaP79621 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CiitaP79621 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CiitaP79621 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
CiitaP79621 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CiitaP79621 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CiitaP79621 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CiitaP79621 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.85□□□□□ -1.31
CiitaP79621 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CiitaP79621 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CiitaP79621 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CiitaP79621 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CiitaP79621 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CiitaP79621 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CiitaP79621 Gm11833-201ENSMUST00000118393 853 ntBASIC6.85□□□□□ -1.31
CiitaP79621 Gm14294-201ENSMUST00000119749 751 ntBASIC6.85□□□□□ -1.31
CiitaP79621 Gm6446-201ENSMUST00000120604 818 ntBASIC6.85□□□□□ -1.31
CiitaP79621 Gm14212-201ENSMUST00000122023 826 ntBASIC6.85□□□□□ -1.31
CiitaP79621 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.85□□□□□ -1.31
CiitaP79621 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.85□□□□□ -1.31
CiitaP79621 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.85□□□□□ -1.31
CiitaP79621 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.85□□□□□ -1.31
CiitaP79621 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CiitaP79621 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CiitaP79621 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.85□□□□□ -1.31
CiitaP79621 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CiitaP79621 Gm37784-201ENSMUST00000193233 189 ntBASIC6.85□□□□□ -1.31
CiitaP79621 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
CiitaP79621 Gm2996-201ENSMUST00000211398 537 ntBASIC6.85□□□□□ -1.31
CiitaP79621 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC6.85□□□□□ -1.31
CiitaP79621 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC6.85□□□□□ -1.31
CiitaP79621 AC161252.1-201ENSMUST00000225536 467 ntBASIC6.85□□□□□ -1.31
CiitaP79621 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CiitaP79621 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.85□□□□□ -1.31
CiitaP79621 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.85□□□□□ -1.31
CiitaP79621 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CiitaP79621 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CiitaP79621 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
CiitaP79621 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.85□□□□□ -1.31
CiitaP79621 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.85□□□□□ -1.31
CiitaP79621 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.85□□□□□ -1.31
CiitaP79621 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.85□□□□□ -1.31
CiitaP79621 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CiitaP79621 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CiitaP79621 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.85□□□□□ -1.31
CiitaP79621 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CiitaP79621 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CiitaP79621 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CiitaP79621 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CiitaP79621 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CiitaP79621 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CiitaP79621 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
CiitaP79621 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CiitaP79621 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CiitaP79621 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CiitaP79621 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CiitaP79621 Gm25795-201ENSMUST00000104421 132 ntBASIC6.84□□□□□ -1.31
CiitaP79621 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC6.84□□□□□ -1.31
CiitaP79621 Gm11821-201ENSMUST00000117335 979 ntBASIC6.84□□□□□ -1.31
CiitaP79621 Gm15616-201ENSMUST00000118662 375 ntBASIC6.84□□□□□ -1.31
CiitaP79621 Gm15300-201ENSMUST00000122324 279 ntBASIC6.84□□□□□ -1.31
CiitaP79621 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.84□□□□□ -1.31
CiitaP79621 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CiitaP79621 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CiitaP79621 Gm15257-201ENSMUST00000177680 883 ntBASIC6.84□□□□□ -1.31
CiitaP79621 Gm15252-201ENSMUST00000177750 883 ntBASIC6.84□□□□□ -1.31
CiitaP79621 Gm15256-201ENSMUST00000177793 883 ntBASIC6.84□□□□□ -1.31
CiitaP79621 Gm15260-201ENSMUST00000179402 883 ntBASIC6.84□□□□□ -1.31
CiitaP79621 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CiitaP79621 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms