Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 AC156504.1-201ENSMUST00000214608 157 ntBASIC7.32□□□□□ -1.24
Sox1P53783 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Sox1P53783 AC118733.1-201ENSMUST00000217387 1217 ntBASIC7.32□□□□□ -1.24
Sox1P53783 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC7.32□□□□□ -1.24
Sox1P53783 AC156560.1-201ENSMUST00000221425 256 ntBASIC7.32□□□□□ -1.24
Sox1P53783 CT954323.2-201ENSMUST00000222056 213 ntBASIC7.32□□□□□ -1.24
Sox1P53783 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Sox1P53783 AC153153.2-201ENSMUST00000223572 411 ntBASIC7.32□□□□□ -1.24
Sox1P53783 AC159205.2-201ENSMUST00000223759 816 ntBASIC7.32□□□□□ -1.24
Sox1P53783 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Sox1P53783 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Sox1P53783 Gm10123-201ENSMUST00000075723 490 ntBASIC7.32□□□□□ -1.24
Sox1P53783 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Sox1P53783 mt-Td-201ENSMUST00000082404 70 ntBASIC7.32□□□□□ -1.24
Sox1P53783 Mir296-201ENSMUST00000083587 79 ntBASIC7.32□□□□□ -1.24
Sox1P53783 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Sox1P53783 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Sox1P53783 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC7.32□□□□□ -1.24
Sox1P53783 Gm36938-201ENSMUST00000191612 2696 ntBASIC7.32□□□□□ -1.24
Sox1P53783 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC7.32□□□□□ -1.24
Sox1P53783 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Sox1P53783 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Sox1P53783 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
Sox1P53783 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 CT009480.1-201ENSMUST00000225771 4480 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Sox1P53783 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC7.31□□□□□ -1.24
Sox1P53783 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Sox1P53783 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Gm13566-201ENSMUST00000117428 1142 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Gm14624-201ENSMUST00000117746 192 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Gm14985-201ENSMUST00000118693 786 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Sox1P53783 Gm4992-201ENSMUST00000120256 768 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Gm15390-201ENSMUST00000120323 738 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Mup-ps28-201ENSMUST00000120686 289 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Gm15242-201ENSMUST00000122459 283 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC7.31□□□□□ -1.24
Sox1P53783 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC7.31□□□□□ -1.24
Sox1P53783 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Gm22795-201ENSMUST00000157233 118 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Sox1P53783 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Sox1P53783 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.31□□□□□ -1.24
Sox1P53783 Gm5272-201ENSMUST00000182730 982 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Mir6398-201ENSMUST00000184541 102 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Gm18699-201ENSMUST00000190713 243 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Gm37430-201ENSMUST00000193039 196 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Gm37710-201ENSMUST00000193501 1274 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Gm43578-201ENSMUST00000201250 459 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Gm44795-201ENSMUST00000205496 319 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Sox1P53783 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC7.31□□□□□ -1.24
Sox1P53783 Olfr958-202ENSMUST00000215505 3514 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Sox1P53783 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC7.31□□□□□ -1.24
Sox1P53783 AC166574.5-201ENSMUST00000227438 1432 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Sox1P53783 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Sox1P53783 Gm25582-201ENSMUST00000083412 110 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Gm25005-201ENSMUST00000083812 156 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Olfr878-201ENSMUST00000086061 1065 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Sox1P53783 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Sox1P53783 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Gm10826-201ENSMUST00000215366 3304 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
Sox1P53783 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Gm44797-201ENSMUST00000208780 1837 ntBASIC7.31□□□□□ -1.24
Sox1P53783 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Sox1P53783 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Sox1P53783 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Sox1P53783 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sox1P53783 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Sox1P53783 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms