Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.88□□□□□ -1.31
Shmt1P50431 Gm26557-201ENSMUST00000180756 493 ntBASIC6.88□□□□□ -1.31
Shmt1P50431 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC6.88□□□□□ -1.31
Shmt1P50431 Gm5260-201ENSMUST00000186157 949 ntBASIC6.88□□□□□ -1.31
Shmt1P50431 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC6.88□□□□□ -1.31
Shmt1P50431 Olfr1055-202ENSMUST00000188023 939 ntBASIC6.88□□□□□ -1.31
Shmt1P50431 Gm20776-201ENSMUST00000189940 700 ntBASIC6.88□□□□□ -1.31
Shmt1P50431 Gm20915-201ENSMUST00000191575 663 ntBASIC6.88□□□□□ -1.31
Shmt1P50431 Gm6074-201ENSMUST00000193340 451 ntBASIC6.88□□□□□ -1.31
Shmt1P50431 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.88□□□□□ -1.31
Shmt1P50431 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.88□□□□□ -1.31
Shmt1P50431 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC6.88□□□□□ -1.31
Shmt1P50431 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.88□□□□□ -1.31
Shmt1P50431 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.88□□□□□ -1.31
Shmt1P50431 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Shmt1P50431 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Shmt1P50431 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Shmt1P50431 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Shmt1P50431 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Shmt1P50431 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Shmt1P50431 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Shmt1P50431 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.88□□□□□ -1.31
Shmt1P50431 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Shmt1P50431 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Shmt1P50431 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Shmt1P50431 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.87□□□□□ -1.31
Shmt1P50431 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Shmt1P50431 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Shmt1P50431 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Shmt1P50431 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Shmt1P50431 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Shmt1P50431 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Shmt1P50431 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC6.87□□□□□ -1.31
Shmt1P50431 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Shmt1P50431 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Shmt1P50431 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Shmt1P50431 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Shmt1P50431 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Shmt1P50431 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Shmt1P50431 Gm14375-201ENSMUST00000119490 855 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Gm14417-201ENSMUST00000120036 1074 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Gm7212-201ENSMUST00000120817 348 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Gm15502-201ENSMUST00000121449 208 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Gm14253-201ENSMUST00000122112 639 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Gm23430-201ENSMUST00000122490 314 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Shmt1P50431 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.87□□□□□ -1.31
Shmt1P50431 Gm6182-201ENSMUST00000156439 1208 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.87□□□□□ -1.31
Shmt1P50431 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Shmt1P50431 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Shmt1P50431 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC6.87□□□□□ -1.31
Shmt1P50431 Gm28466-201ENSMUST00000190678 659 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.87□□□□□ -1.31
Shmt1P50431 Gm44422-201ENSMUST00000204142 1025 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.87□□□□□ -1.31
Shmt1P50431 Gm46364-201ENSMUST00000218548 319 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 CT025579.4-201ENSMUST00000224598 627 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC6.87□□□□□ -1.31
Shmt1P50431 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Shmt1P50431 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Shmt1P50431 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Shmt1P50431 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Shmt1P50431 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Shmt1P50431 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.87□□□□□ -1.31
Shmt1P50431 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Shmt1P50431 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Shmt1P50431 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Shmt1P50431 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Shmt1P50431 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Shmt1P50431 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Shmt1P50431 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
Shmt1P50431 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
Shmt1P50431 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Shmt1P50431 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Shmt1P50431 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Shmt1P50431 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.86□□□□□ -1.31
Shmt1P50431 AC153143.1-201ENSMUST00000222966 1340 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms