Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm43503-201ENSMUST00000200033 3408 ntBASIC7.03□□□□□ -1.28
Col2a1P28481 Gm14895-201ENSMUST00000121858 1361 ntBASIC7.03□□□□□ -1.28
Col2a1P28481 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC7.03□□□□□ -1.28
Col2a1P28481 Mir449c-201ENSMUST00000102192 109 ntBASIC7.03□□□□□ -1.28
Col2a1P28481 Gm25564-201ENSMUST00000104604 132 ntBASIC7.03□□□□□ -1.28
Col2a1P28481 Gm15078-201ENSMUST00000118371 782 ntBASIC7.03□□□□□ -1.28
Col2a1P28481 Gm6744-201ENSMUST00000119303 543 ntBASIC7.03□□□□□ -1.28
Col2a1P28481 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC7.03□□□□□ -1.28
Col2a1P28481 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm25445-201ENSMUST00000158996 299 ntBASIC7.03□□□□□ -1.28
Col2a1P28481 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm5430-201ENSMUST00000182525 915 ntBASIC7.03□□□□□ -1.28
Col2a1P28481 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC7.03□□□□□ -1.28
Col2a1P28481 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Col2a1P28481 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC7.03□□□□□ -1.28
Col2a1P28481 Gm18689-201ENSMUST00000203969 902 ntBASIC7.03□□□□□ -1.28
Col2a1P28481 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC7.03□□□□□ -1.28
Col2a1P28481 Mir375-201ENSMUST00000083682 64 ntBASIC7.03□□□□□ -1.28
Col2a1P28481 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm43627-201ENSMUST00000197119 2299 ntBASIC7.02□□□□□ -1.28
Col2a1P28481 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col2a1P28481 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Col2a1P28481 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC7.02□□□□□ -1.29
Col2a1P28481 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col2a1P28481 Gm42873-201ENSMUST00000196110 1726 ntBASIC7.02□□□□□ -1.29
Col2a1P28481 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col2a1P28481 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC7.02□□□□□ -1.29
Col2a1P28481 Gm44697-201ENSMUST00000207756 1679 ntBASIC7.02□□□□□ -1.29
Col2a1P28481 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col2a1P28481 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col2a1P28481 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC7.02□□□□□ -1.29
Col2a1P28481 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col2a1P28481 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col2a1P28481 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Col2a1P28481 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col2a1P28481 Gm42613-201ENSMUST00000199975 1931 ntBASIC7.02□□□□□ -1.29
Col2a1P28481 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col2a1P28481 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC7.02□□□□□ -1.29
Col2a1P28481 Gm22867-201ENSMUST00000157499 109 ntBASIC7.02□□□□□ -1.29
Col2a1P28481 Gm27960-201ENSMUST00000183445 184 ntBASIC7.02□□□□□ -1.29
Col2a1P28481 Gm23011-202ENSMUST00000197855 275 ntBASIC7.02□□□□□ -1.29
Col2a1P28481 Gm44316-201ENSMUST00000199274 97 ntBASIC7.02□□□□□ -1.29
Col2a1P28481 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC7.02□□□□□ -1.29
Col2a1P28481 Gm3785-201ENSMUST00000221000 202 ntBASIC7.02□□□□□ -1.29
Col2a1P28481 AC124826.1-201ENSMUST00000221651 325 ntBASIC7.02□□□□□ -1.29
Col2a1P28481 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Col2a1P28481 Gm8412-201ENSMUST00000077493 440 ntBASIC7.02□□□□□ -1.29
Col2a1P28481 Gm16335-201ENSMUST00000077495 309 ntBASIC7.02□□□□□ -1.29
Col2a1P28481 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC7.02□□□□□ -1.29
Col2a1P28481 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Col2a1P28481 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col2a1P28481 Gm8750-201ENSMUST00000173278 1537 ntBASIC7.02□□□□□ -1.29
Col2a1P28481 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Col2a1P28481 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col2a1P28481 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC7.02□□□□□ -1.29
Col2a1P28481 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col2a1P28481 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC7.02□□□□□ -1.29
Col2a1P28481 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Col2a1P28481 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Col2a1P28481 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col2a1P28481 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col2a1P28481 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col2a1P28481 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
Col2a1P28481 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col2a1P28481 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Col2a1P28481 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col2a1P28481 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col2a1P28481 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col2a1P28481 Gm18632-201ENSMUST00000222597 2087 ntBASIC7.01□□□□□ -1.29
Col2a1P28481 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Col2a1P28481 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7.01□□□□□ -1.29
Col2a1P28481 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Col2a1P28481 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms