Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm18850-201ENSMUST00000211578 388 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 AL603745.1-201ENSMUST00000215473 532 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Mir337-201ENSMUST00000083592 97 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm33167-201ENSMUST00000201933 2643 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm24789-201ENSMUST00000104282 131 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Mir5103-201ENSMUST00000175111 79 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm24303-201ENSMUST00000178237 126 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm2058-201ENSMUST00000178791 560 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm3650-201ENSMUST00000180600 747 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm27225-201ENSMUST00000183833 557 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm29159-201ENSMUST00000187969 379 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Mir375-201ENSMUST00000083682 64 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm37347-201ENSMUST00000193969 3071 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm42898-201ENSMUST00000200370 3073 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm14373-201ENSMUST00000122467 2158 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm43343-201ENSMUST00000202454 1926 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a4A2AX52 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm11894-201ENSMUST00000121579 328 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm11787-201ENSMUST00000121996 1050 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm3605-201ENSMUST00000185858 440 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm44382-201ENSMUST00000198683 122 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC5.24□□□□□ -1.57
Col6a4A2AX52 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.24□□□□□ -1.57
Col6a4A2AX52 AC152394.1-201ENSMUST00000227360 1086 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm42653-201ENSMUST00000200644 2839 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm44797-201ENSMUST00000208780 1837 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm12482-201ENSMUST00000120435 630 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm23276-201ENSMUST00000157913 138 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm6611-201ENSMUST00000163830 1272 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm27039-201ENSMUST00000182438 962 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm18348-201ENSMUST00000191227 820 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm37103-201ENSMUST00000191830 115 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm17934-201ENSMUST00000192818 422 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm43222-201ENSMUST00000199013 603 ntBASIC5.24□□□□□ -1.57
Col6a4A2AX52 Gm36448-201ENSMUST00000199916 438 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 109.9 ms