Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC7.53□□□□□ -1.2
Ccdc9Q8VC31 AC165260.1-201ENSMUST00000224127 683 ntBASIC7.53□□□□□ -1.2
Ccdc9Q8VC31 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc9Q8VC31 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc9Q8VC31 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Ccdc9Q8VC31 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Ccdc9Q8VC31 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc9Q8VC31 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Ccdc9Q8VC31 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc9Q8VC31 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc9Q8VC31 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc9Q8VC31 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
Ccdc9Q8VC31 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.52□□□□□ -1.2
Ccdc9Q8VC31 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 AC156031.1-201ENSMUST00000217288 2555 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Mir697-201ENSMUST00000102316 109 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm25564-201ENSMUST00000104604 132 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm12306-201ENSMUST00000117256 171 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm11865-201ENSMUST00000118093 859 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm11371-201ENSMUST00000120294 385 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm14465-201ENSMUST00000120603 567 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm12459-201ENSMUST00000120659 356 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm2735-201ENSMUST00000136133 277 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm10157-201ENSMUST00000139408 343 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm9697-201ENSMUST00000147052 997 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm24477-201ENSMUST00000157438 103 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Mir7005-201ENSMUST00000185089 69 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm5261-201ENSMUST00000185860 713 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm37716-201ENSMUST00000193553 947 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm7512-201ENSMUST00000195217 1170 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm45259-201ENSMUST00000209217 1006 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm2996-201ENSMUST00000211398 537 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gcnt2-204ENSMUST00000223570 335 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 AV026068-219ENSMUST00000224148 933 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 CT025639.2-201ENSMUST00000224440 1220 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 AC165287.1-201ENSMUST00000224985 178 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Diaph3-204ENSMUST00000226254 682 ntBASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc9Q8VC31 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm43361-201ENSMUST00000196562 4690 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm42686-201ENSMUST00000199172 4108 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm17170-201ENSMUST00000112785 316 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm7058-201ENSMUST00000119209 902 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm12321-201ENSMUST00000121485 804 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm15022-201ENSMUST00000122074 746 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm26182-201ENSMUST00000157688 116 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm26509-201ENSMUST00000180947 948 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm18698-201ENSMUST00000192327 668 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm2979-201ENSMUST00000193442 463 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm37436-201ENSMUST00000193842 1085 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm43040-201ENSMUST00000202399 558 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm44971-201ENSMUST00000206192 337 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm45722-201ENSMUST00000213075 466 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm8137-201ENSMUST00000218997 463 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms