Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm23555-201ENSMUST00000157815 135 ntBASIC9.18□□□□□ -0.94
Trim35Q8C006 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm24105-201ENSMUST00000174933 293 ntBASIC9.18□□□□□ -0.94
Trim35Q8C006 Scnn1a-203ENSMUST00000176110 3494 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm23660-201ENSMUST00000178362 79 ntBASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm24088-201ENSMUST00000179100 79 ntBASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm23648-201ENSMUST00000180301 107 ntBASIC9.18□□□□□ -0.94
Trim35Q8C006 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm29422-201ENSMUST00000188062 694 ntBASIC9.18□□□□□ -0.94
Trim35Q8C006 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm29119-201ENSMUST00000189973 696 ntBASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm29572-201ENSMUST00000190305 283 ntTSL 5 BASIC9.18□□□□□ -0.94
Trim35Q8C006 Pex5l-209ENSMUST00000193289 3526 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm38156-201ENSMUST00000194601 2260 ntBASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm17806-201ENSMUST00000195844 383 ntBASIC9.18□□□□□ -0.94
Trim35Q8C006 Pah-201ENSMUST00000020241 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm45590-201ENSMUST00000209715 262 ntBASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm17989-201ENSMUST00000211543 412 ntBASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm35755-201ENSMUST00000222392 2077 ntBASIC9.18□□□□□ -0.94
Trim35Q8C006 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Pnmal1-201ENSMUST00000038163 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm23506-201ENSMUST00000083077 107 ntBASIC9.18□□□□□ -0.94
Trim35Q8C006 Defa32-201ENSMUST00000084041 425 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Defa20-201ENSMUST00000084042 425 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Ablim1-203ENSMUST00000104902 5907 ntTSL 5 BASIC9.18□□□□□ -0.94
Trim35Q8C006 AC156802.2-201ENSMUST00000225239 5740 ntBASIC9.18□□□□□ -0.94
Trim35Q8C006 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Rgs12-206ENSMUST00000114284 3624 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm26672-202ENSMUST00000180931 3602 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 AC160562.1-201ENSMUST00000216170 3468 ntTSL 5 BASIC9.18□□□□□ -0.94
Trim35Q8C006 Prn-202ENSMUST00000136783 3370 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Trim35Q8C006 Adgrf2-201ENSMUST00000113614 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Trim35Q8C006 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Vill-201ENSMUST00000051386 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Uba3-202ENSMUST00000164744 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm15128-201ENSMUST00000112814 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm26945-201ENSMUST00000183191 2011 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 AC159282.1-203ENSMUST00000220232 1972 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Zscan26-201ENSMUST00000032820 3918 ntTSL 3 BASIC9.17□□□□□ -0.94
Trim35Q8C006 Swt1-201ENSMUST00000064771 3688 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Rpusd4-201ENSMUST00000034543 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm43615-201ENSMUST00000197465 1773 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm9903-201ENSMUST00000181102 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Clec10a-202ENSMUST00000102571 1496 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm25213-201ENSMUST00000102388 113 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm23908-201ENSMUST00000104599 132 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm14276-201ENSMUST00000117941 720 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm5400-201ENSMUST00000118494 943 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm6797-201ENSMUST00000119440 512 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm16423-201ENSMUST00000120078 947 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm13543-201ENSMUST00000121230 796 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Mup9-207ENSMUST00000132829 598 ntTSL 5 BASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm3091-201ENSMUST00000163408 484 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC9.17□□□□□ -0.94
Trim35Q8C006 Mir3100-201ENSMUST00000174918 65 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 1700009J07Rik-201ENSMUST00000178996 912 ntTSL 5 BASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm26739-201ENSMUST00000181041 427 ntTSL 3 BASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm27747-201ENSMUST00000184707 85 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm37369-201ENSMUST00000194179 615 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm42915-201ENSMUST00000197478 323 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm7434-201ENSMUST00000208558 408 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 AC122372.1-201ENSMUST00000215344 280 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 AC125399.1-201ENSMUST00000224236 595 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm8174-201ENSMUST00000064353 1001 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm2710-201ENSMUST00000073196 603 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Gpx2-201ENSMUST00000082431 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Mup11-201ENSMUST00000084544 601 ntTSL 5 BASIC9.17□□□□□ -0.94
Trim35Q8C006 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Trim35Q8C006 Olfr169-203ENSMUST00000215476 2476 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trim35Q8C006 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
Trim35Q8C006 Dgkg-202ENSMUST00000089925 3555 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC9.17□□□□□ -0.94
Trim35Q8C006 Dpp6-202ENSMUST00000101471 4491 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm11548-201ENSMUST00000140203 2199 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Cpeb1os1-201ENSMUST00000207156 2112 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Arhgap17-211ENSMUST00000207010 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 1700126A01Rik-201ENSMUST00000185283 2061 ntBASIC9.17□□□□□ -0.94
Trim35Q8C006 Gls-203ENSMUST00000114512 2042 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trim35Q8C006 Zfp740-203ENSMUST00000119800 3882 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim35Q8C006 Hdac9-207ENSMUST00000210724 2811 ntTSL 5 BASIC9.17□□□□□ -0.94
Trim35Q8C006 Gm39459-201ENSMUST00000215662 1895 ntTSL 5 BASIC9.17□□□□□ -0.94
Trim35Q8C006 Rfx3-208ENSMUST00000174850 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms