Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm44777-201ENSMUST00000205941 4052 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm43429-201ENSMUST00000197889 2251 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Sox9Q04887 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 AC159264.1-201ENSMUST00000224844 4257 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm6101-201ENSMUST00000195384 1867 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm18508-201ENSMUST00000215790 1642 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Sox9Q04887 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm43606-201ENSMUST00000195938 3556 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Sox9Q04887 Gm44130-201ENSMUST00000205157 3004 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox9Q04887 AC139750.1-201ENSMUST00000223962 1300 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox9Q04887 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC7.03□□□□□ -1.28
Sox9Q04887 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox9Q04887 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Sox9Q04887 AC156163.1-201ENSMUST00000215598 3369 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox9Q04887 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox9Q04887 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox9Q04887 Mir669p-2-201ENSMUST00000103868 87 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 Mir669p-1-201ENSMUST00000103884 87 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 Gm24888-201ENSMUST00000104387 130 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 Gm12584-201ENSMUST00000117109 1105 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 Gm15073-201ENSMUST00000117432 634 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 Gm12985-201ENSMUST00000118376 183 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Sox9Q04887 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Sox9Q04887 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC7.03□□□□□ -1.28
Sox9Q04887 Gm26000-201ENSMUST00000157991 107 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 Gm24733-201ENSMUST00000158863 253 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox9Q04887 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Sox9Q04887 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC7.03□□□□□ -1.28
Sox9Q04887 Mir6986-201ENSMUST00000184483 58 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 Igkv3-8-201ENSMUST00000197635 339 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Sox9Q04887 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC7.03□□□□□ -1.28
Sox9Q04887 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.03□□□□□ -1.28
Sox9Q04887 AC153646.1-201ENSMUST00000223229 1279 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox9Q04887 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Sox9Q04887 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox9Q04887 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox9Q04887 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Sox9Q04887 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Sox9Q04887 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC7.03□□□□□ -1.28
Sox9Q04887 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Sox9Q04887 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Sox9Q04887 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.03□□□□□ -1.28
Sox9Q04887 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Sox9Q04887 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.03□□□□□ -1.28
Sox9Q04887 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.02□□□□□ -1.28
Sox9Q04887 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 Gm43328-201ENSMUST00000198544 1434 ntBASIC7.02□□□□□ -1.29
Sox9Q04887 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
Sox9Q04887 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox9Q04887 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox9Q04887 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 Gm37420-201ENSMUST00000195332 2912 ntBASIC7.02□□□□□ -1.29
Sox9Q04887 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Sox9Q04887 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.02□□□□□ -1.29
Sox9Q04887 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Sox9Q04887 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox9Q04887 Gm14756-201ENSMUST00000116395 240 ntBASIC7.02□□□□□ -1.29
Sox9Q04887 Gm13890-201ENSMUST00000117578 390 ntBASIC7.02□□□□□ -1.29
Sox9Q04887 Gm2199-201ENSMUST00000119065 874 ntBASIC7.02□□□□□ -1.29
Sox9Q04887 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC7.02□□□□□ -1.29
Sox9Q04887 Gm3810-201ENSMUST00000122413 476 ntBASIC7.02□□□□□ -1.29
Sox9Q04887 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Sox9Q04887 Gm22523-201ENSMUST00000158696 100 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms