Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm12643-201ENSMUST00000116078 374 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm12442-201ENSMUST00000118372 338 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm11833-201ENSMUST00000118393 853 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm11987-201ENSMUST00000118524 381 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm7189-201ENSMUST00000119811 429 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm15194-201ENSMUST00000120453 434 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm14212-201ENSMUST00000122023 826 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm9428-201ENSMUST00000127214 769 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm23259-201ENSMUST00000158318 303 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 Mir7211-201ENSMUST00000184071 63 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Nkx3-1P97436 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Nkx3-1P97436 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Nkx3-1P97436 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm44360-201ENSMUST00000200081 82 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 AC154633.1-201ENSMUST00000223276 449 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Nkx3-1P97436 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Olfr467-201ENSMUST00000084756 927 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 AC138765.2-202ENSMUST00000228418 3435 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Gm14245-201ENSMUST00000118939 1843 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Nkx3-1P97436 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Gm14550-201ENSMUST00000117918 407 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 Gm14300-201ENSMUST00000120800 946 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 Gm8317-201ENSMUST00000121261 471 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Gm25065-201ENSMUST00000177914 132 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 Gm20778-201ENSMUST00000178524 627 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Gm25891-201ENSMUST00000180050 132 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 Gm26923-201ENSMUST00000182615 996 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 Mir7220-201ENSMUST00000183978 60 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 Gm37072-201ENSMUST00000194570 837 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 Gm36939-201ENSMUST00000194889 439 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 Gm43160-201ENSMUST00000196453 421 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Gm44213-201ENSMUST00000204977 703 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 AC211878.6-201ENSMUST00000221896 358 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 AC129085.2-201ENSMUST00000223763 2800 ntBASIC5.49□□□□□ -1.53
Nkx3-1P97436 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Nkx3-1P97436 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Nkx3-1P97436 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.48□□□□□ -1.53
Nkx3-1P97436 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms