Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Hivep3-209ENSMUST00000166542 7253 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HttP42859 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HttP42859 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HttP42859 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HttP42859 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.36□□□□□ -1.39
HttP42859 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC6.36□□□□□ -1.39
HttP42859 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.36□□□□□ -1.39
HttP42859 Vis1-201ENSMUST00000183957 201 ntBASIC6.36□□□□□ -1.39
HttP42859 Gm38291-201ENSMUST00000193671 259 ntBASIC6.36□□□□□ -1.39
HttP42859 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC6.36□□□□□ -1.39
HttP42859 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC6.36□□□□□ -1.39
HttP42859 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HttP42859 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HttP42859 Gm4822-201ENSMUST00000077551 479 ntBASIC6.36□□□□□ -1.39
HttP42859 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC6.36□□□□□ -1.39
HttP42859 Eya3-202ENSMUST00000079157 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HttP42859 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC6.36□□□□□ -1.39
HttP42859 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HttP42859 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HttP42859 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HttP42859 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HttP42859 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
HttP42859 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HttP42859 Gm13737-201ENSMUST00000119793 232 ntBASIC6.36□□□□□ -1.39
HttP42859 Gm9085-201ENSMUST00000119994 1072 ntBASIC6.36□□□□□ -1.39
HttP42859 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.36□□□□□ -1.39
HttP42859 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HttP42859 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.36□□□□□ -1.39
HttP42859 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.36□□□□□ -1.39
HttP42859 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC6.36□□□□□ -1.39
HttP42859 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC6.36□□□□□ -1.39
HttP42859 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.36□□□□□ -1.39
HttP42859 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC6.36□□□□□ -1.39
HttP42859 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HttP42859 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HttP42859 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HttP42859 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
HttP42859 Gm10286-201ENSMUST00000093603 5077 ntBASIC6.36□□□□□ -1.39
HttP42859 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC6.36□□□□□ -1.39
HttP42859 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HttP42859 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HttP42859 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.36□□□□□ -1.39
HttP42859 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HttP42859 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC6.36□□□□□ -1.39
HttP42859 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HttP42859 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC6.36□□□□□ -1.39
HttP42859 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.36□□□□□ -1.39
HttP42859 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC6.36□□□□□ -1.39
HttP42859 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HttP42859 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HttP42859 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HttP42859 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HttP42859 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HttP42859 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HttP42859 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.36□□□□□ -1.39
HttP42859 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HttP42859 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HttP42859 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HttP42859 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HttP42859 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC6.35□□□□□ -1.39
HttP42859 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.35□□□□□ -1.39
HttP42859 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
HttP42859 Sall1-201ENSMUST00000034090 5265 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HttP42859 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC6.35□□□□□ -1.39
HttP42859 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
HttP42859 Gm11625-201ENSMUST00000119535 296 ntBASIC6.35□□□□□ -1.39
HttP42859 Gm24628-201ENSMUST00000122761 289 ntBASIC6.35□□□□□ -1.39
HttP42859 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.35□□□□□ -1.39
HttP42859 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.35□□□□□ -1.39
HttP42859 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC6.35□□□□□ -1.39
HttP42859 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HttP42859 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
HttP42859 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HttP42859 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
HttP42859 Gm45191-201ENSMUST00000205846 5439 ntBASIC6.35□□□□□ -1.39
HttP42859 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HttP42859 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HttP42859 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HttP42859 Gm37048-201ENSMUST00000194827 5578 ntBASIC6.35□□□□□ -1.39
HttP42859 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HttP42859 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HttP42859 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HttP42859 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HttP42859 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC6.35□□□□□ -1.39
HttP42859 Gm25422-201ENSMUST00000104219 129 ntBASIC6.35□□□□□ -1.39
HttP42859 Gm9429-201ENSMUST00000117804 868 ntBASIC6.35□□□□□ -1.39
HttP42859 Gm14172-201ENSMUST00000118255 644 ntBASIC6.35□□□□□ -1.39
HttP42859 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HttP42859 Gm16571-201ENSMUST00000159112 291 ntBASIC6.35□□□□□ -1.39
HttP42859 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HttP42859 Gm45908-201ENSMUST00000212977 1177 ntBASIC6.35□□□□□ -1.39
HttP42859 AC133517.2-201ENSMUST00000226820 690 ntBASIC6.35□□□□□ -1.39
HttP42859 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC6.35□□□□□ -1.39
HttP42859 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HttP42859 Gm5925-201ENSMUST00000105016 1497 ntBASIC6.35□□□□□ -1.39
HttP42859 AC117769.3-201ENSMUST00000225814 1664 ntBASIC6.35□□□□□ -1.39
HttP42859 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HttP42859 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HttP42859 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HttP42859 Gm42837-201ENSMUST00000197071 2829 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms