Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm43946-201ENSMUST00000204058 886 ntBASIC7.05□□□□□ -1.28
Col2a1P28481 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Col2a1P28481 AC127242.4-201ENSMUST00000221242 470 ntBASIC7.05□□□□□ -1.28
Col2a1P28481 AC154767.2-201ENSMUST00000224584 414 ntBASIC7.05□□□□□ -1.28
Col2a1P28481 AC136376.1-201ENSMUST00000228496 950 ntBASIC7.05□□□□□ -1.28
Col2a1P28481 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Col2a1P28481 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col2a1P28481 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC7.05□□□□□ -1.28
Col2a1P28481 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col2a1P28481 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col2a1P28481 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col2a1P28481 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Col2a1P28481 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col2a1P28481 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col2a1P28481 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col2a1P28481 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
Col2a1P28481 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col2a1P28481 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col2a1P28481 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col2a1P28481 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col2a1P28481 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col2a1P28481 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col2a1P28481 AC154841.1-201ENSMUST00000227263 1479 ntBASIC7.05□□□□□ -1.28
Col2a1P28481 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col2a1P28481 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col2a1P28481 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col2a1P28481 Gm12308-201ENSMUST00000120440 389 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC7.04□□□□□ -1.28
Col2a1P28481 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC7.04□□□□□ -1.28
Col2a1P28481 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col2a1P28481 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC7.04□□□□□ -1.28
Col2a1P28481 Gm23539-201ENSMUST00000157537 224 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC7.04□□□□□ -1.28
Col2a1P28481 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col2a1P28481 Gm24957-201ENSMUST00000179604 132 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 Mir7008-201ENSMUST00000184398 63 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 Gm37838-201ENSMUST00000194464 312 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 Gm37235-201ENSMUST00000195171 59 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 Gm33242-201ENSMUST00000212130 1057 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC7.04□□□□□ -1.28
Col2a1P28481 CT010431.1-201ENSMUST00000221249 1080 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 n-R5s69-201ENSMUST00000083872 119 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 Gm38036-201ENSMUST00000194586 3564 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col2a1P28481 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col2a1P28481 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col2a1P28481 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col2a1P28481 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col2a1P28481 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col2a1P28481 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col2a1P28481 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col2a1P28481 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col2a1P28481 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col2a1P28481 Gm42885-201ENSMUST00000200763 4214 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 Gm44102-201ENSMUST00000204031 1666 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col2a1P28481 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col2a1P28481 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC7.04□□□□□ -1.28
Col2a1P28481 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col2a1P28481 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col2a1P28481 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col2a1P28481 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col2a1P28481 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col2a1P28481 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC7.04□□□□□ -1.28
Col2a1P28481 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col2a1P28481 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col2a1P28481 Gm15186-201ENSMUST00000119345 563 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col2a1P28481 Gm23030-201ENSMUST00000158004 273 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col2a1P28481 Gm9671-201ENSMUST00000171502 547 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col2a1P28481 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC7.04□□□□□ -1.28
Col2a1P28481 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC7.04□□□□□ -1.28
Col2a1P28481 Gm4742-201ENSMUST00000200261 771 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 Gm44225-201ENSMUST00000203582 186 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 AC170810.1-201ENSMUST00000228267 672 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col2a1P28481 Gm5229-201ENSMUST00000039375 354 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col2a1P28481 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col2a1P28481 Gm23502-201ENSMUST00000083902 145 ntBASIC7.04□□□□□ -1.28
Col2a1P28481 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col2a1P28481 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col2a1P28481 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.03□□□□□ -1.28
Col2a1P28481 Gm37894-201ENSMUST00000195416 2599 ntBASIC7.03□□□□□ -1.28
Col2a1P28481 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC7.03□□□□□ -1.28
Col2a1P28481 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms