Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm36758-201ENSMUST00000222594 310 ntBASIC8.31□□□□□ -1.08
NpcdF8VQB8 AC146601.1-201ENSMUST00000227910 905 ntBASIC8.31□□□□□ -1.08
NpcdF8VQB8 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NpcdF8VQB8 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NpcdF8VQB8 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
NpcdF8VQB8 Olfr480-201ENSMUST00000071658 1029 ntBASIC8.31□□□□□ -1.08
NpcdF8VQB8 AW822073-201ENSMUST00000075305 555 ntBASIC8.31□□□□□ -1.08
NpcdF8VQB8 Mir196a-1-201ENSMUST00000083612 102 ntBASIC8.31□□□□□ -1.08
NpcdF8VQB8 AC174797.5-201ENSMUST00000225055 1860 ntBASIC8.31□□□□□ -1.08
NpcdF8VQB8 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.31□□□□□ -1.08
NpcdF8VQB8 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
NpcdF8VQB8 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
NpcdF8VQB8 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NpcdF8VQB8 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
NpcdF8VQB8 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NpcdF8VQB8 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NpcdF8VQB8 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 AC134860.3-201ENSMUST00000223564 1300 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Gm9432-201ENSMUST00000117810 759 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 Gm6931-201ENSMUST00000183103 371 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Gm37135-201ENSMUST00000192652 534 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 Gm31306-201ENSMUST00000197517 508 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 Gm44282-201ENSMUST00000203199 190 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC8.3□□□□□ -1.08
NpcdF8VQB8 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 Gm18586-201ENSMUST00000217265 518 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC8.3□□□□□ -1.08
NpcdF8VQB8 CT485612.1-201ENSMUST00000222555 382 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 AC126554.3-201ENSMUST00000223131 493 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 AC161374.1-201ENSMUST00000224191 794 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 AL669819.1-201ENSMUST00000225143 330 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 AC154324.1-201ENSMUST00000226711 814 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 CT009600.1-201ENSMUST00000228771 337 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 AC154806.5-204ENSMUST00000228900 867 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 AC022775.1-201ENSMUST00000228163 2698 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC8.3□□□□□ -1.08
NpcdF8VQB8 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NpcdF8VQB8 Gm18594-201ENSMUST00000175733 1403 ntBASIC8.29□□□□□ -1.08
NpcdF8VQB8 Gm42611-201ENSMUST00000199446 3407 ntBASIC8.29□□□□□ -1.08
NpcdF8VQB8 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
NpcdF8VQB8 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NpcdF8VQB8 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NpcdF8VQB8 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NpcdF8VQB8 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC8.29□□□□□ -1.08
NpcdF8VQB8 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
NpcdF8VQB8 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC8.29□□□□□ -1.08
NpcdF8VQB8 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
NpcdF8VQB8 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC8.29□□□□□ -1.08
NpcdF8VQB8 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NpcdF8VQB8 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC8.29□□□□□ -1.08
NpcdF8VQB8 Gm15040-201ENSMUST00000118561 1241 ntBASIC8.29□□□□□ -1.08
NpcdF8VQB8 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC8.29□□□□□ -1.08
NpcdF8VQB8 Gm14906-201ENSMUST00000119265 390 ntBASIC8.29□□□□□ -1.08
NpcdF8VQB8 Gm11485-201ENSMUST00000120048 1175 ntBASIC8.29□□□□□ -1.08
NpcdF8VQB8 Gm12618-201ENSMUST00000121754 483 ntBASIC8.29□□□□□ -1.08
NpcdF8VQB8 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC8.29□□□□□ -1.08
NpcdF8VQB8 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
NpcdF8VQB8 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC8.29□□□□□ -1.08
NpcdF8VQB8 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NpcdF8VQB8 Gm23229-201ENSMUST00000157297 105 ntBASIC8.29□□□□□ -1.08
NpcdF8VQB8 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
NpcdF8VQB8 Gm26557-201ENSMUST00000180756 493 ntBASIC8.29□□□□□ -1.08
NpcdF8VQB8 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms