Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Olfr702-204ENSMUST00000219803 1646 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm28382-201ENSMUST00000187902 1669 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm38024-201ENSMUST00000192338 2532 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 Vamp4-201ENSMUST00000050010 2532 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Otog-202ENSMUST00000209802 3558 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Adam17-202ENSMUST00000101551 4469 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Golm1-202ENSMUST00000095739 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Tspan9-203ENSMUST00000112173 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Cntrob-201ENSMUST00000092973 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Srgap1-202ENSMUST00000081688 7787 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Olfr161-202ENSMUST00000216259 7133 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Cpa5-203ENSMUST00000115139 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Sycp1-202ENSMUST00000196988 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Snap25-201ENSMUST00000028727 2116 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Il1rap-203ENSMUST00000166294 3200 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Adgrl3-218ENSMUST00000122037 4649 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm10398-201ENSMUST00000100826 397 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Ighv2-5-201ENSMUST00000103449 347 ntAPPRIS ALT2 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Ighv3-8-201ENSMUST00000103483 394 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm25763-201ENSMUST00000104099 129 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm22659-201ENSMUST00000104195 130 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Eif5a-204ENSMUST00000108607 852 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm15720-201ENSMUST00000117133 282 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm14173-201ENSMUST00000117690 278 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm13122-201ENSMUST00000118380 453 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Mup-ps21-201ENSMUST00000119998 448 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm11888-201ENSMUST00000120471 810 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm12318-201ENSMUST00000121235 273 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm16058-201ENSMUST00000124392 427 ntTSL 2 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm8817-201ENSMUST00000126769 693 ntTSL 2 BASIC9.19□□□□□ -0.94
Trim35Q8C006 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm15325-201ENSMUST00000149661 697 ntTSL 2 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm24013-201ENSMUST00000157727 99 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm15664-201ENSMUST00000160167 184 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Coq8a-208ENSMUST00000160879 561 ntTSL 5 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm26445-201ENSMUST00000177557 109 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC9.19□□□□□ -0.94
Trim35Q8C006 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm42767-201ENSMUST00000198583 632 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm44331-201ENSMUST00000203217 388 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Kcne3-207ENSMUST00000208260 929 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm7943-201ENSMUST00000212078 1034 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm36539-201ENSMUST00000217543 497 ntTSL 5 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm40723-201ENSMUST00000219407 603 ntTSL 3 BASIC9.19□□□□□ -0.94
Trim35Q8C006 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC9.19□□□□□ -0.94
Trim35Q8C006 CT025689.3-201ENSMUST00000223817 301 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Ofcc1-202ENSMUST00000224813 1043 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 AC118704.1-201ENSMUST00000225022 695 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm26206-201ENSMUST00000082908 110 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Mir325-201ENSMUST00000083491 98 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Mir129-2-201ENSMUST00000083577 90 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Olfr70-201ENSMUST00000055545 2568 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Ovgp1-201ENSMUST00000000573 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Mapk6-202ENSMUST00000168937 4089 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm35288-201ENSMUST00000216565 2731 ntTSL 5 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm43323-201ENSMUST00000202328 4258 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Def8-205ENSMUST00000108832 3242 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Def8-201ENSMUST00000001522 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Npy4r-201ENSMUST00000052164 3627 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Ccdc162-201ENSMUST00000019955 1891 ntTSL 5 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm44167-201ENSMUST00000204957 1878 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 St3gal6-201ENSMUST00000114357 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Nr1h4-202ENSMUST00000105296 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm44416-201ENSMUST00000204055 2066 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Epn2-202ENSMUST00000108711 4287 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Serpina5-201ENSMUST00000021495 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Taok3-201ENSMUST00000092889 4354 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Myo5c-201ENSMUST00000036555 6727 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trim35Q8C006 Gm45220-201ENSMUST00000207847 2509 ntBASIC9.19□□□□□ -0.94
Trim35Q8C006 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trim35Q8C006 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Pcdh15-241ENSMUST00000195531 5241 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Trim35Q8C006 Zwilch-201ENSMUST00000122091 2957 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Scfd2-201ENSMUST00000072857 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Tacr3-201ENSMUST00000029822 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Trim35Q8C006 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Trav9-4-201ENSMUST00000103662 395 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Trim35Q8C006 Vegfa-203ENSMUST00000113519 513 ntTSL 5 BASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm13407-201ENSMUST00000118256 360 ntBASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm14119-201ENSMUST00000119511 235 ntBASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm13670-201ENSMUST00000120947 461 ntBASIC9.18□□□□□ -0.94
Trim35Q8C006 Entpd5-206ENSMUST00000122194 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC9.18□□□□□ -0.94
Trim35Q8C006 Gm22843-201ENSMUST00000157710 134 ntBASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms