Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Gm14018-201ENSMUST00000119042 455 ntBASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Gm12400-201ENSMUST00000120915 1003 ntBASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Gm22428-201ENSMUST00000158554 132 ntBASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Gm5244-202ENSMUST00000189517 743 ntBASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Gm17824-201ENSMUST00000197690 805 ntBASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Gm43436-201ENSMUST00000199308 147 ntBASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.69□□□□□ -1.34
Upf3bQ3ULL6 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Gm14054-201ENSMUST00000120744 704 ntBASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Gm12438-201ENSMUST00000122034 336 ntBASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Gm25962-201ENSMUST00000157173 168 ntBASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Gm22223-201ENSMUST00000157360 125 ntBASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Gm24359-201ENSMUST00000158418 221 ntBASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Gm43157-201ENSMUST00000198223 412 ntBASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Gm44538-201ENSMUST00000205615 348 ntBASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Upf3bQ3ULL6 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Gm13469-201ENSMUST00000118231 350 ntBASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Gm13818-201ENSMUST00000119441 511 ntBASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Gm12115-201ENSMUST00000119969 447 ntBASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Gm13642-201ENSMUST00000121697 381 ntBASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Gm11609-201ENSMUST00000121926 793 ntBASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 239.7 ms