Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Gm22426-201ENSMUST00000103811 96 ntBASIC5.84□□□□□ -1.47
Spg11Q3UHA3 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Gm37710-201ENSMUST00000193501 1274 ntBASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Gm45276-201ENSMUST00000209549 1086 ntBASIC5.84□□□□□ -1.47
Spg11Q3UHA3 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Gm20302-201ENSMUST00000080671 275 ntBASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Spg11Q3UHA3 Gm43187-201ENSMUST00000200652 2397 ntBASIC5.84□□□□□ -1.48
Spg11Q3UHA3 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Spg11Q3UHA3 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Spg11Q3UHA3 AC093043.2-201ENSMUST00000228616 2017 ntBASIC5.84□□□□□ -1.48
Spg11Q3UHA3 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.84□□□□□ -1.48
Spg11Q3UHA3 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.84□□□□□ -1.48
Spg11Q3UHA3 Gm24905-201ENSMUST00000158129 104 ntBASIC5.84□□□□□ -1.48
Spg11Q3UHA3 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.84□□□□□ -1.48
Spg11Q3UHA3 Olfr1214-202ENSMUST00000216026 2126 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Spg11Q3UHA3 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Spg11Q3UHA3 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.84□□□□□ -1.48
Spg11Q3UHA3 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Spg11Q3UHA3 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm6081-201ENSMUST00000134472 489 ntBASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm28377-201ENSMUST00000189695 720 ntBASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.83□□□□□ -1.48
Spg11Q3UHA3 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm44090-201ENSMUST00000204669 1834 ntBASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm6620-201ENSMUST00000120113 715 ntBASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm13531-201ENSMUST00000121893 543 ntBASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm16285-201ENSMUST00000162999 347 ntBASIC5.83□□□□□ -1.48
Spg11Q3UHA3 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm29284-201ENSMUST00000188363 255 ntBASIC5.83□□□□□ -1.48
Spg11Q3UHA3 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Spg11Q3UHA3 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 118.3 ms