Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm23706-201ENSMUST00000104369 82 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm25317-201ENSMUST00000116824 129 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm15539-201ENSMUST00000118452 566 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm13459-201ENSMUST00000121558 646 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Trav8-2-201ENSMUST00000130122 337 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 BC021767-202ENSMUST00000136988 905 ntTSL 3 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm25150-201ENSMUST00000157121 60 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm23094-201ENSMUST00000157551 322 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm25767-201ENSMUST00000158572 124 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm23823-201ENSMUST00000158740 124 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm20451-201ENSMUST00000173452 273 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm29562-201ENSMUST00000190113 904 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm29435-201ENSMUST00000191310 689 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm29739-201ENSMUST00000191760 529 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm37669-201ENSMUST00000192184 820 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Ighv1-8-201ENSMUST00000192236 293 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm8388-201ENSMUST00000193000 756 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm42667-201ENSMUST00000196132 234 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 4930553I04Rik-201ENSMUST00000196722 670 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 4930432M17Rik-202ENSMUST00000196899 1128 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm43476-201ENSMUST00000197873 405 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm18611-201ENSMUST00000200334 1118 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm44033-201ENSMUST00000203699 695 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Rarres2-205ENSMUST00000204930 681 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm8999-201ENSMUST00000204951 969 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm44615-201ENSMUST00000206548 358 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Eif3k-202ENSMUST00000207683 647 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm44954-201ENSMUST00000208513 227 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Cthrc1-204ENSMUST00000226433 596 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Hist1h1t-201ENSMUST00000041052 912 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Olfr96-201ENSMUST00000078209 1051 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm25129-201ENSMUST00000082651 133 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm44288-201ENSMUST00000205061 2795 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.57□□□□□ -1.52
Trim63Q38HM4 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Trim63Q38HM4 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim63Q38HM4 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim63Q38HM4 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Trim63Q38HM4 CT009757.4-201ENSMUST00000221520 2541 ntBASIC5.56□□□□□ -1.52
Trim63Q38HM4 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim63Q38HM4 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.56□□□□□ -1.52
Trim63Q38HM4 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim63Q38HM4 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim63Q38HM4 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.56□□□□□ -1.52
Trim63Q38HM4 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.56□□□□□ -1.52
Trim63Q38HM4 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim63Q38HM4 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.56□□□□□ -1.52
Trim63Q38HM4 Gm18248-201ENSMUST00000191164 1846 ntBASIC5.56□□□□□ -1.52
Trim63Q38HM4 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trim63Q38HM4 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim63Q38HM4 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim63Q38HM4 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim63Q38HM4 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim63Q38HM4 Mir705-201ENSMUST00000102058 82 ntBASIC5.56□□□□□ -1.52
Trim63Q38HM4 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim63Q38HM4 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim63Q38HM4 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim63Q38HM4 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim63Q38HM4 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim63Q38HM4 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim63Q38HM4 Gm14676-201ENSMUST00000117722 858 ntBASIC5.56□□□□□ -1.52
Trim63Q38HM4 Gm8661-201ENSMUST00000118688 992 ntBASIC5.56□□□□□ -1.52
Trim63Q38HM4 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.56□□□□□ -1.52
Trim63Q38HM4 Gm12849-201ENSMUST00000120013 739 ntBASIC5.56□□□□□ -1.52
Trim63Q38HM4 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim63Q38HM4 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms