Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC5.52□□□□□ -1.53
Nkx3-1P97436 Gm8256-203ENSMUST00000228692 591 ntBASIC5.52□□□□□ -1.53
Nkx3-1P97436 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nkx3-1P97436 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Nkx3-1P97436 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.52□□□□□ -1.53
Nkx3-1P97436 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nkx3-1P97436 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nkx3-1P97436 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nkx3-1P97436 Gm18310-201ENSMUST00000206494 3912 ntBASIC5.52□□□□□ -1.53
Nkx3-1P97436 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nkx3-1P97436 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
Nkx3-1P97436 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nkx3-1P97436 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Nkx3-1P97436 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Nkx3-1P97436 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Nkx3-1P97436 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nkx3-1P97436 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nkx3-1P97436 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm9519-201ENSMUST00000206108 1337 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm37234-201ENSMUST00000193259 1441 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm45290-201ENSMUST00000211177 3890 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm25917-201ENSMUST00000104267 130 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm22952-201ENSMUST00000116720 120 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm4342-201ENSMUST00000118982 367 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm13626-201ENSMUST00000119435 402 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm26023-201ENSMUST00000122722 313 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm15257-201ENSMUST00000177680 883 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm15252-201ENSMUST00000177750 883 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm15256-201ENSMUST00000177793 883 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm15260-201ENSMUST00000179402 883 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm28665-201ENSMUST00000189269 670 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm8009-201ENSMUST00000191672 436 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm4332-201ENSMUST00000196114 346 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 AC117769.2-201ENSMUST00000224612 469 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm28379-202ENSMUST00000187676 2896 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm8700-201ENSMUST00000222187 3054 ntBASIC5.51□□□□□ -1.53
Nkx3-1P97436 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Nkx3-1P97436 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Nkx3-1P97436 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Nkx3-1P97436 AC124581.3-201ENSMUST00000224270 1624 ntBASIC5.5□□□□□ -1.53
Nkx3-1P97436 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms