Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm18907-201ENSMUST00000209719 932 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 Gm6581-201ENSMUST00000214545 260 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 AC160112.1-201ENSMUST00000219139 714 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC8.22□□□□□ -1.09
Rfx1P48377 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC8.22□□□□□ -1.09
Rfx1P48377 Gm9315-201ENSMUST00000222696 908 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 CT009556.3-201ENSMUST00000226173 513 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 AC154806.1-202ENSMUST00000227949 885 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 AC124715.1-201ENSMUST00000228480 754 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 AC130219.2-201ENSMUST00000228765 807 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC8.22□□□□□ -1.09
Rfx1P48377 AC132336.1-201ENSMUST00000222844 1740 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 AC162301.1-201ENSMUST00000228785 1542 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 AC135119.1-204ENSMUST00000228036 2663 ntBASIC8.22□□□□□ -1.09
Rfx1P48377 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rfx1P48377 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Rfx1P48377 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC8.22□□□□□ -1.09
Rfx1P48377 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC8.21□□□□□ -1.09
Rfx1P48377 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Rfx1P48377 AC093022.3-201ENSMUST00000226569 1926 ntBASIC8.21□□□□□ -1.09
Rfx1P48377 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rfx1P48377 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC8.21□□□□□ -1.09
Rfx1P48377 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Rfx1P48377 Gm43395-201ENSMUST00000198717 2240 ntBASIC8.21□□□□□ -1.09
Rfx1P48377 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rfx1P48377 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rfx1P48377 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Rfx1P48377 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Rfx1P48377 Gm25422-201ENSMUST00000104219 129 ntBASIC8.21□□□□□ -1.1
Rfx1P48377 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC8.21□□□□□ -1.1
Rfx1P48377 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC8.21□□□□□ -1.1
Rfx1P48377 Gm14905-201ENSMUST00000122351 639 ntBASIC8.21□□□□□ -1.1
Rfx1P48377 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC8.21□□□□□ -1.1
Rfx1P48377 Gm25505-201ENSMUST00000157220 246 ntBASIC8.21□□□□□ -1.1
Rfx1P48377 Gm24738-201ENSMUST00000158856 123 ntBASIC8.21□□□□□ -1.1
Rfx1P48377 Gm15740-201ENSMUST00000159703 1292 ntBASIC8.21□□□□□ -1.1
Rfx1P48377 Gm24561-201ENSMUST00000175182 95 ntBASIC8.21□□□□□ -1.1
Rfx1P48377 Rab26os-201ENSMUST00000176215 477 ntBASIC8.21□□□□□ -1.1
Rfx1P48377 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC8.21□□□□□ -1.1
Rfx1P48377 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Rfx1P48377 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Rfx1P48377 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Rfx1P48377 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC8.21□□□□□ -1.1
Rfx1P48377 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC8.21□□□□□ -1.1
Rfx1P48377 Gm8077-201ENSMUST00000209221 1024 ntBASIC8.21□□□□□ -1.1
Rfx1P48377 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Rfx1P48377 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC8.21□□□□□ -1.1
Rfx1P48377 AC132590.1-201ENSMUST00000224374 1164 ntBASIC8.21□□□□□ -1.1
Rfx1P48377 AC134869.2-201ENSMUST00000225788 421 ntBASIC8.21□□□□□ -1.1
Rfx1P48377 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Rfx1P48377 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Rfx1P48377 Gm22504-201ENSMUST00000082963 139 ntBASIC8.21□□□□□ -1.1
Rfx1P48377 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Rfx1P48377 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Rfx1P48377 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rfx1P48377 Gm43483-201ENSMUST00000196724 2860 ntBASIC8.21□□□□□ -1.1
Rfx1P48377 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC8.21□□□□□ -1.1
Rfx1P48377 Gm37283-201ENSMUST00000193111 1571 ntBASIC8.21□□□□□ -1.1
Rfx1P48377 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rfx1P48377 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC8.21□□□□□ -1.1
Rfx1P48377 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC8.21□□□□□ -1.1
Rfx1P48377 AC107742.1-201ENSMUST00000227769 1390 ntBASIC8.21□□□□□ -1.1
Rfx1P48377 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC8.21□□□□□ -1.1
Rfx1P48377 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rfx1P48377 Gm11282-201ENSMUST00000119018 1416 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 Gm14445-201ENSMUST00000117051 1484 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Gm14912-201ENSMUST00000120166 1773 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Rfx1P48377 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Rfx1P48377 Gm9030-201ENSMUST00000218405 2410 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Rfx1P48377 Gm9029-201ENSMUST00000219232 2410 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Rfx1P48377 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Rfx1P48377 Gm44895-201ENSMUST00000206670 1538 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC8.2□□□□□ -1.1
Rfx1P48377 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 Mir697-201ENSMUST00000102316 109 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Gm22439-201ENSMUST00000104048 132 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Gm24373-201ENSMUST00000104393 132 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Gm13130-201ENSMUST00000119195 1166 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Gm14906-201ENSMUST00000119265 390 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC8.2□□□□□ -1.1
Rfx1P48377 Gm23031-201ENSMUST00000157998 119 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Gm3208-201ENSMUST00000168281 427 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Gm4373-201ENSMUST00000178571 556 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Gm21894-201ENSMUST00000179631 546 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms