Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HttP42859 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HttP42859 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HttP42859 Gm11561-201ENSMUST00000117429 417 ntBASIC6.39□□□□□ -1.39
HttP42859 Gm8367-201ENSMUST00000186145 887 ntBASIC6.39□□□□□ -1.39
HttP42859 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC6.39□□□□□ -1.39
HttP42859 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
HttP42859 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HttP42859 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HttP42859 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
HttP42859 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
HttP42859 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
HttP42859 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
HttP42859 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC6.38□□□□□ -1.39
HttP42859 Gm14775-201ENSMUST00000122089 310 ntBASIC6.38□□□□□ -1.39
HttP42859 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Gm25826-201ENSMUST00000157090 137 ntBASIC6.38□□□□□ -1.39
HttP42859 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Gm18702-201ENSMUST00000196923 588 ntBASIC6.38□□□□□ -1.39
HttP42859 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
HttP42859 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
HttP42859 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Gm4263-201ENSMUST00000220693 1101 ntBASIC6.38□□□□□ -1.39
HttP42859 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
HttP42859 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
HttP42859 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC6.38□□□□□ -1.39
HttP42859 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC6.38□□□□□ -1.39
HttP42859 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.38□□□□□ -1.39
HttP42859 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Prpf4-201ENSMUST00000084524 5223 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.38□□□□□ -1.39
HttP42859 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC6.38□□□□□ -1.39
HttP42859 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.38□□□□□ -1.39
HttP42859 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Gm43078-201ENSMUST00000197222 168 ntBASIC6.38□□□□□ -1.39
HttP42859 Gm44837-201ENSMUST00000206863 717 ntBASIC6.38□□□□□ -1.39
HttP42859 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.38□□□□□ -1.39
HttP42859 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
HttP42859 Gm22826-201ENSMUST00000083774 165 ntBASIC6.38□□□□□ -1.39
HttP42859 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.38□□□□□ -1.39
HttP42859 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.38□□□□□ -1.39
HttP42859 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HttP42859 Gm37663-201ENSMUST00000191887 2299 ntBASIC6.38□□□□□ -1.39
HttP42859 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC6.37□□□□□ -1.39
HttP42859 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HttP42859 Creb1-202ENSMUST00000087366 8364 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HttP42859 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HttP42859 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HttP42859 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HttP42859 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HttP42859 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.37□□□□□ -1.39
HttP42859 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.37□□□□□ -1.39
HttP42859 AC129085.4-201ENSMUST00000224536 570 ntBASIC6.37□□□□□ -1.39
HttP42859 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HttP42859 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC6.37□□□□□ -1.39
HttP42859 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HttP42859 Eya3-201ENSMUST00000020197 4976 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HttP42859 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
HttP42859 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HttP42859 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HttP42859 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC6.37□□□□□ -1.39
HttP42859 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HttP42859 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.37□□□□□ -1.39
HttP42859 Gm11908-201ENSMUST00000117755 347 ntBASIC6.37□□□□□ -1.39
HttP42859 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC6.37□□□□□ -1.39
HttP42859 Gm22367-201ENSMUST00000178930 132 ntBASIC6.37□□□□□ -1.39
HttP42859 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.37□□□□□ -1.39
HttP42859 Gm7887-201ENSMUST00000056948 537 ntBASIC6.37□□□□□ -1.39
HttP42859 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HttP42859 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HttP42859 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HttP42859 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HttP42859 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
HttP42859 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HttP42859 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HttP42859 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HttP42859 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.37□□□□□ -1.39
HttP42859 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HttP42859 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HttP42859 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HttP42859 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms