Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chd1P40201 Gm43712-201ENSMUST00000198020 291 ntBASIC9.35□□□□□ -0.91
Chd1P40201 AC132384.8-201ENSMUST00000218152 1204 ntBASIC9.35□□□□□ -0.91
Chd1P40201 AC167222.2-201ENSMUST00000220014 295 ntBASIC9.35□□□□□ -0.91
Chd1P40201 AC159208.1-201ENSMUST00000221403 649 ntBASIC9.35□□□□□ -0.91
Chd1P40201 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC9.35□□□□□ -0.91
Chd1P40201 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
Chd1P40201 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd1P40201 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Chd1P40201 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd1P40201 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chd1P40201 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd1P40201 Gm37132-201ENSMUST00000195553 2238 ntBASIC9.35□□□□□ -0.91
Chd1P40201 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chd1P40201 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC9.35□□□□□ -0.91
Chd1P40201 Gm5844-201ENSMUST00000119417 2191 ntBASIC9.35□□□□□ -0.91
Chd1P40201 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chd1P40201 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chd1P40201 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chd1P40201 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chd1P40201 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Chd1P40201 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Chd1P40201 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Chd1P40201 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd1P40201 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd1P40201 Adar-202ENSMUST00000098924 5909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd1P40201 Gm24860-201ENSMUST00000158457 276 ntBASIC9.34□□□□□ -0.91
Chd1P40201 Gm23774-201ENSMUST00000158990 131 ntBASIC9.34□□□□□ -0.91
Chd1P40201 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC9.34□□□□□ -0.91
Chd1P40201 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC9.34□□□□□ -0.91
Chd1P40201 Gm21850-201ENSMUST00000179792 359 ntBASIC9.34□□□□□ -0.91
Chd1P40201 Gm8367-201ENSMUST00000186145 887 ntBASIC9.34□□□□□ -0.91
Chd1P40201 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC9.34□□□□□ -0.91
Chd1P40201 Gm28188-201ENSMUST00000190483 236 ntBASIC9.34□□□□□ -0.91
Chd1P40201 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC9.34□□□□□ -0.91
Chd1P40201 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Chd1P40201 AC211878.2-201ENSMUST00000222486 488 ntBASIC9.34□□□□□ -0.91
Chd1P40201 CU062626.1-201ENSMUST00000225248 505 ntBASIC9.34□□□□□ -0.91
Chd1P40201 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Chd1P40201 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Chd1P40201 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Chd1P40201 AC107453.4-201ENSMUST00000227068 1817 ntBASIC9.34□□□□□ -0.91
Chd1P40201 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd1P40201 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd1P40201 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd1P40201 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Chd1P40201 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Chd1P40201 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd1P40201 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chd1P40201 Gm44661-201ENSMUST00000208830 3503 ntBASIC9.34□□□□□ -0.91
Chd1P40201 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC9.34□□□□□ -0.91
Chd1P40201 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Chd1P40201 Gm27543-201ENSMUST00000183562 177 ntBASIC9.34□□□□□ -0.92
Chd1P40201 Gm18863-201ENSMUST00000217004 1299 ntBASIC9.34□□□□□ -0.92
Chd1P40201 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
Chd1P40201 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC9.34□□□□□ -0.92
Chd1P40201 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC9.34□□□□□ -0.92
Chd1P40201 AC130217.2-201ENSMUST00000224009 2990 ntBASIC9.34□□□□□ -0.92
Chd1P40201 Zfp429-203ENSMUST00000224684 524 ntBASIC9.34□□□□□ -0.92
Chd1P40201 AC164302.1-201ENSMUST00000227036 433 ntBASIC9.34□□□□□ -0.92
Chd1P40201 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Chd1P40201 Gm25187-201ENSMUST00000083906 133 ntBASIC9.34□□□□□ -0.92
Chd1P40201 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd1P40201 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd1P40201 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Chd1P40201 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC9.33□□□□□ -0.92
Chd1P40201 Gm17791-201ENSMUST00000185660 1501 ntBASIC9.33□□□□□ -0.92
Chd1P40201 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Chd1P40201 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC9.33□□□□□ -0.92
Chd1P40201 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC9.33□□□□□ -0.92
Chd1P40201 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd1P40201 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd1P40201 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Chd1P40201 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd1P40201 Gm45073-201ENSMUST00000207688 4247 ntBASIC9.33□□□□□ -0.92
Chd1P40201 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Chd1P40201 Gm14388-201ENSMUST00000118119 477 ntBASIC9.33□□□□□ -0.92
Chd1P40201 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC9.33□□□□□ -0.92
Chd1P40201 Mir6943-201ENSMUST00000185186 66 ntBASIC9.33□□□□□ -0.92
Chd1P40201 Gm29376-201ENSMUST00000189357 835 ntBASIC9.33□□□□□ -0.92
Chd1P40201 Gm20203-201ENSMUST00000192352 332 ntBASIC9.33□□□□□ -0.92
Chd1P40201 Gm44494-201ENSMUST00000196760 129 ntBASIC9.33□□□□□ -0.92
Chd1P40201 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Chd1P40201 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Chd1P40201 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Chd1P40201 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Chd1P40201 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC9.33□□□□□ -0.92
Chd1P40201 Gm44022-201ENSMUST00000203708 5429 ntBASIC9.33□□□□□ -0.92
Chd1P40201 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Chd1P40201 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Chd1P40201 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd1P40201 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd1P40201 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Chd1P40201 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Chd1P40201 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Chd1P40201 Gm36930-201ENSMUST00000195431 2376 ntBASIC9.32□□□□□ -0.92
Chd1P40201 Gm13488-201ENSMUST00000120419 179 ntBASIC9.32□□□□□ -0.92
Chd1P40201 Gm26106-201ENSMUST00000157254 228 ntBASIC9.32□□□□□ -0.92
Chd1P40201 Gm46369-201ENSMUST00000221577 401 ntBASIC9.32□□□□□ -0.92
Chd1P40201 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms