Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Mir5107-201ENSMUST00000175586 88 ntBASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Mir3090-201ENSMUST00000175597 87 ntBASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Gm19560-201ENSMUST00000177510 514 ntBASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Gm37609-201ENSMUST00000191778 678 ntBASIC6.44□□□□□ -1.38
Cstf1Q99LC2 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Gm18838-201ENSMUST00000204855 886 ntBASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Gm44982-201ENSMUST00000208795 471 ntBASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.44□□□□□ -1.38
Cstf1Q99LC2 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cstf1Q99LC2 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm12643-201ENSMUST00000116078 374 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm11852-201ENSMUST00000120806 222 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm12400-201ENSMUST00000120915 1003 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm9597-201ENSMUST00000171913 602 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Mir199b-201ENSMUST00000175066 110 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm3650-201ENSMUST00000180600 747 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm27219-201ENSMUST00000184633 742 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm29197-201ENSMUST00000185922 702 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm37380-201ENSMUST00000193752 397 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm42814-201ENSMUST00000199370 460 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm5886-202ENSMUST00000203957 522 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm38840-201ENSMUST00000204716 843 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm5119-201ENSMUST00000215858 634 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cstf1Q99LC2 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Gm15715-201ENSMUST00000118032 283 ntBASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Gm23740-201ENSMUST00000157385 100 ntBASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Gm25459-201ENSMUST00000157953 114 ntBASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Gm7745-201ENSMUST00000182235 973 ntBASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.42□□□□□ -1.38
Cstf1Q99LC2 AC140409.4-201ENSMUST00000215757 538 ntBASIC6.42□□□□□ -1.38
Cstf1Q99LC2 Gm7802-201ENSMUST00000216464 262 ntBASIC6.42□□□□□ -1.38
Cstf1Q99LC2 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.42□□□□□ -1.38
Cstf1Q99LC2 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms