Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm17136-201ENSMUST00000169993 411 ntBASIC9.21□□□□□ -0.94
Trim35Q8C006 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Trim35Q8C006 Gm23144-201ENSMUST00000180226 107 ntBASIC9.21□□□□□ -0.94
Trim35Q8C006 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC9.21□□□□□ -0.94
Trim35Q8C006 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC9.21□□□□□ -0.94
Trim35Q8C006 Gm38040-201ENSMUST00000193505 225 ntBASIC9.21□□□□□ -0.94
Trim35Q8C006 Igkv13-76-201ENSMUST00000197621 347 ntBASIC9.21□□□□□ -0.94
Trim35Q8C006 Gm19726-201ENSMUST00000205008 240 ntBASIC9.21□□□□□ -0.94
Trim35Q8C006 Gm8268-201ENSMUST00000209683 458 ntBASIC9.21□□□□□ -0.94
Trim35Q8C006 AC171206.1-201ENSMUST00000213612 213 ntBASIC9.21□□□□□ -0.94
Trim35Q8C006 Il18-204ENSMUST00000214117 860 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 AC162934.2-201ENSMUST00000221451 249 ntBASIC9.21□□□□□ -0.94
Trim35Q8C006 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 AC158525.1-201ENSMUST00000223806 576 ntBASIC9.21□□□□□ -0.94
Trim35Q8C006 AC167019.2-201ENSMUST00000227335 845 ntBASIC9.21□□□□□ -0.94
Trim35Q8C006 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 Gm3839-201ENSMUST00000181173 1712 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Trim35Q8C006 Camk2a-202ENSMUST00000039904 1734 ntTSL 5 BASIC9.21□□□□□ -0.94
Trim35Q8C006 Bves-201ENSMUST00000095715 4368 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
Trim35Q8C006 Atp2c1-216ENSMUST00000177074 2664 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Trim35Q8C006 Osmr-204ENSMUST00000176826 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 Kcns3-202ENSMUST00000164495 2332 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 Gm43229-201ENSMUST00000201812 1850 ntBASIC9.21□□□□□ -0.94
Trim35Q8C006 Gm32072-201ENSMUST00000200803 1434 ntBASIC9.21□□□□□ -0.94
Trim35Q8C006 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 Mtmr6-201ENSMUST00000022563 3813 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 Cdh16-201ENSMUST00000163783 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 Gm10101-202ENSMUST00000181311 2919 ntBASIC9.21□□□□□ -0.94
Trim35Q8C006 Lmod2-201ENSMUST00000031694 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 Sec31a-210ENSMUST00000182886 4047 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Trim35Q8C006 Nutm2-201ENSMUST00000096633 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 Serpina3n-201ENSMUST00000021506 2064 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 F730016J06Rik-202ENSMUST00000128888 3699 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm4915-201ENSMUST00000121909 1569 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 AA414992-201ENSMUST00000221571 1576 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 Rnf38-204ENSMUST00000107836 1694 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm44697-201ENSMUST00000207756 1679 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 Stxbp5l-205ENSMUST00000114782 3996 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Rad54b-201ENSMUST00000070755 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Prpf39-201ENSMUST00000120580 4069 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm15927-203ENSMUST00000148641 1788 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm43788-201ENSMUST00000201539 2417 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm14910-201ENSMUST00000121037 1805 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 Pmm2-201ENSMUST00000023396 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Ccdc180-204ENSMUST00000178561 5081 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Trex1-202ENSMUST00000112053 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm11558-201ENSMUST00000118454 459 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm3244-201ENSMUST00000120938 390 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm16027-201ENSMUST00000161618 758 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Mir5099-201ENSMUST00000175257 74 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm24106-201ENSMUST00000175498 127 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm22263-201ENSMUST00000180060 104 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 B020031M17Rik-202ENSMUST00000180768 925 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm6931-201ENSMUST00000183103 371 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 Mir6965-201ENSMUST00000184733 64 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm44247-201ENSMUST00000203875 277 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm21818-202ENSMUST00000225144 894 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Trim35Q8C006 AC165265.1-201ENSMUST00000225929 439 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 AC122393.2-201ENSMUST00000226404 1093 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 AC154598.1-201ENSMUST00000227079 347 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm10080-201ENSMUST00000075585 438 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 Il1rl2-201ENSMUST00000095020 1950 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Lpin3-202ENSMUST00000109455 3365 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Nt5c1b-217ENSMUST00000219826 2023 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Asic2-202ENSMUST00000066197 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Crxos-204ENSMUST00000150050 2090 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Htr2b-201ENSMUST00000027431 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 1700019J19Rik-205ENSMUST00000216531 2813 ntTSL 5 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Rprd1b-201ENSMUST00000029180 4283 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm42515-201ENSMUST00000199936 3583 ntBASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Olfr97-203ENSMUST00000213328 2168 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Trim35Q8C006 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Ndrg3-203ENSMUST00000109558 4023 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim35Q8C006 Gm37916-201ENSMUST00000192153 2435 ntBASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms