Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ClpbQ60649 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
ClpbQ60649 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
ClpbQ60649 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
ClpbQ60649 Gm18493-201ENSMUST00000192084 1612 ntBASIC6.21□□□□□ -1.41
ClpbQ60649 Gm37755-201ENSMUST00000195880 2179 ntBASIC6.21□□□□□ -1.41
ClpbQ60649 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
ClpbQ60649 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
ClpbQ60649 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
ClpbQ60649 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
ClpbQ60649 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
ClpbQ60649 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ClpbQ60649 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ClpbQ60649 Gm11445-201ENSMUST00000119101 532 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Gm11504-201ENSMUST00000120211 173 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Gm12229-201ENSMUST00000120487 468 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Gm14038-201ENSMUST00000121500 807 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Gm6067-201ENSMUST00000121648 491 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.21□□□□□ -1.42
ClpbQ60649 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC6.21□□□□□ -1.42
ClpbQ60649 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ClpbQ60649 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ClpbQ60649 Gm17091-201ENSMUST00000163248 357 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Gm8582-201ENSMUST00000164061 789 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ClpbQ60649 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.21□□□□□ -1.42
ClpbQ60649 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
ClpbQ60649 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.21□□□□□ -1.42
ClpbQ60649 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.21□□□□□ -1.42
ClpbQ60649 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
ClpbQ60649 Gm8190-201ENSMUST00000199603 586 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Gm43772-201ENSMUST00000202052 379 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Gm43867-201ENSMUST00000203860 525 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Gm45078-201ENSMUST00000205343 546 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Gm45196-201ENSMUST00000206751 825 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Gm4290-201ENSMUST00000206897 814 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Gm44869-201ENSMUST00000208836 357 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC6.21□□□□□ -1.42
ClpbQ60649 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC6.21□□□□□ -1.42
ClpbQ60649 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.21□□□□□ -1.42
ClpbQ60649 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Gm23238-201ENSMUST00000083007 164 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Gm37183-201ENSMUST00000191712 3405 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
ClpbQ60649 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
ClpbQ60649 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ClpbQ60649 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.21□□□□□ -1.42
ClpbQ60649 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
ClpbQ60649 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
ClpbQ60649 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.21□□□□□ -1.42
ClpbQ60649 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
ClpbQ60649 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ClpbQ60649 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.21□□□□□ -1.42
ClpbQ60649 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
ClpbQ60649 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
ClpbQ60649 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
ClpbQ60649 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ClpbQ60649 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ClpbQ60649 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
ClpbQ60649 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ClpbQ60649 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ClpbQ60649 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.2□□□□□ -1.42
ClpbQ60649 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ClpbQ60649 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.2□□□□□ -1.42
ClpbQ60649 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ClpbQ60649 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
ClpbQ60649 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
ClpbQ60649 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
ClpbQ60649 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.2□□□□□ -1.42
ClpbQ60649 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
ClpbQ60649 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ClpbQ60649 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ClpbQ60649 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.2□□□□□ -1.42
ClpbQ60649 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ClpbQ60649 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ClpbQ60649 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
ClpbQ60649 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ClpbQ60649 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.2□□□□□ -1.42
ClpbQ60649 Gm15596-201ENSMUST00000121139 784 ntBASIC6.2□□□□□ -1.42
ClpbQ60649 Gm11609-201ENSMUST00000121926 793 ntBASIC6.2□□□□□ -1.42
ClpbQ60649 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ClpbQ60649 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ClpbQ60649 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.2□□□□□ -1.42
ClpbQ60649 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ClpbQ60649 Gm23674-201ENSMUST00000157473 131 ntBASIC6.2□□□□□ -1.42
ClpbQ60649 Gm25550-201ENSMUST00000158079 128 ntBASIC6.2□□□□□ -1.42
ClpbQ60649 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms