Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.84□□□□□ -1.31
NcanP55066 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
NcanP55066 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.84□□□□□ -1.31
NcanP55066 Gm15016-201ENSMUST00000117300 720 ntBASIC6.84□□□□□ -1.31
NcanP55066 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC6.84□□□□□ -1.31
NcanP55066 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
NcanP55066 Gm22895-201ENSMUST00000157508 308 ntBASIC6.84□□□□□ -1.31
NcanP55066 Gm3307-201ENSMUST00000176164 632 ntBASIC6.84□□□□□ -1.31
NcanP55066 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NcanP55066 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.84□□□□□ -1.31
NcanP55066 Gm8942-201ENSMUST00000217892 400 ntBASIC6.84□□□□□ -1.31
NcanP55066 AC154484.2-201ENSMUST00000228359 818 ntBASIC6.84□□□□□ -1.31
NcanP55066 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
NcanP55066 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
NcanP55066 Mir143-201ENSMUST00000083511 63 ntBASIC6.84□□□□□ -1.31
NcanP55066 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
NcanP55066 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
NcanP55066 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
NcanP55066 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NcanP55066 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
NcanP55066 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.84□□□□□ -1.31
NcanP55066 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NcanP55066 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
NcanP55066 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC6.84□□□□□ -1.31
NcanP55066 Prkaa1-202ENSMUST00000228218 4618 ntBASIC6.84□□□□□ -1.31
NcanP55066 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NcanP55066 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NcanP55066 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
NcanP55066 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NcanP55066 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
NcanP55066 Gm44021-201ENSMUST00000203055 3516 ntBASIC6.83□□□□□ -1.32
NcanP55066 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NcanP55066 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NcanP55066 AC102847.2-201ENSMUST00000227799 2906 ntBASIC6.83□□□□□ -1.32
NcanP55066 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC6.83□□□□□ -1.32
NcanP55066 Gm11105-201ENSMUST00000112781 478 ntBASIC6.83□□□□□ -1.32
NcanP55066 Gm14173-201ENSMUST00000117690 278 ntBASIC6.83□□□□□ -1.32
NcanP55066 Gm13006-201ENSMUST00000118683 214 ntBASIC6.83□□□□□ -1.32
NcanP55066 Gm13737-201ENSMUST00000119793 232 ntBASIC6.83□□□□□ -1.32
NcanP55066 Gm14746-201ENSMUST00000120309 741 ntBASIC6.83□□□□□ -1.32
NcanP55066 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC6.83□□□□□ -1.32
NcanP55066 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.83□□□□□ -1.32
NcanP55066 Gm21772-201ENSMUST00000169213 478 ntBASIC6.83□□□□□ -1.32
NcanP55066 Gm17126-201ENSMUST00000172276 523 ntBASIC6.83□□□□□ -1.32
NcanP55066 Gm3715-201ENSMUST00000172308 617 ntBASIC6.83□□□□□ -1.32
NcanP55066 Gm18833-201ENSMUST00000173218 862 ntBASIC6.83□□□□□ -1.32
NcanP55066 Gm9499-201ENSMUST00000180888 964 ntBASIC6.83□□□□□ -1.32
NcanP55066 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NcanP55066 Gm17918-201ENSMUST00000205315 574 ntBASIC6.83□□□□□ -1.32
NcanP55066 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6.83□□□□□ -1.32
NcanP55066 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
NcanP55066 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC6.83□□□□□ -1.32
NcanP55066 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC6.83□□□□□ -1.32
NcanP55066 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC6.83□□□□□ -1.32
NcanP55066 CT030182.2-201ENSMUST00000223569 620 ntBASIC6.83□□□□□ -1.32
NcanP55066 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.83□□□□□ -1.32
NcanP55066 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
NcanP55066 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
NcanP55066 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
NcanP55066 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
NcanP55066 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.83□□□□□ -1.32
NcanP55066 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
NcanP55066 Gm2065-201ENSMUST00000194697 2757 ntBASIC6.83□□□□□ -1.32
NcanP55066 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.83□□□□□ -1.32
NcanP55066 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NcanP55066 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.83□□□□□ -1.32
NcanP55066 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC6.83□□□□□ -1.32
NcanP55066 Gm45477-201ENSMUST00000200213 5498 ntBASIC6.83□□□□□ -1.32
NcanP55066 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NcanP55066 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.82□□□□□ -1.32
NcanP55066 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NcanP55066 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NcanP55066 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NcanP55066 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
NcanP55066 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
NcanP55066 Gm14373-201ENSMUST00000122467 2158 ntBASIC6.82□□□□□ -1.32
NcanP55066 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NcanP55066 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
NcanP55066 Gm6786-201ENSMUST00000203165 1915 ntBASIC6.82□□□□□ -1.32
NcanP55066 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NcanP55066 Dennd6a-203ENSMUST00000224111 2692 ntBASIC6.82□□□□□ -1.32
NcanP55066 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
NcanP55066 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC6.82□□□□□ -1.32
NcanP55066 Gm26079-201ENSMUST00000104066 133 ntBASIC6.82□□□□□ -1.32
NcanP55066 Gm14294-201ENSMUST00000119749 751 ntBASIC6.82□□□□□ -1.32
NcanP55066 Gm6062-201ENSMUST00000120462 631 ntBASIC6.82□□□□□ -1.32
NcanP55066 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.82□□□□□ -1.32
NcanP55066 Gm24534-201ENSMUST00000157949 291 ntBASIC6.82□□□□□ -1.32
NcanP55066 Gm25224-201ENSMUST00000158195 68 ntBASIC6.82□□□□□ -1.32
NcanP55066 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
NcanP55066 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.82□□□□□ -1.32
NcanP55066 Mir8097-201ENSMUST00000185150 119 ntBASIC6.82□□□□□ -1.32
NcanP55066 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NcanP55066 Gm37493-201ENSMUST00000193167 433 ntBASIC6.82□□□□□ -1.32
NcanP55066 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NcanP55066 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NcanP55066 Gm43456-201ENSMUST00000202519 457 ntBASIC6.82□□□□□ -1.32
NcanP55066 Gm38840-201ENSMUST00000204716 843 ntBASIC6.82□□□□□ -1.32
NcanP55066 Gm45777-201ENSMUST00000213009 301 ntBASIC6.82□□□□□ -1.32
NcanP55066 AC117240.2-201ENSMUST00000220921 263 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms