Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm11903-201ENSMUST00000118958 727 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Gm14869-201ENSMUST00000119007 884 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Gm13338-201ENSMUST00000120235 361 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Gm6142-201ENSMUST00000120290 325 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Gm14787-201ENSMUST00000121236 388 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Gm23657-201ENSMUST00000122623 294 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 Mir1930-201ENSMUST00000158799 84 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Gm22701-201ENSMUST00000175371 291 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 Gm26528-201ENSMUST00000181965 283 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Gm28416-201ENSMUST00000188334 292 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Gm37383-201ENSMUST00000191750 745 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Gm42782-201ENSMUST00000197286 522 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 Gm43084-201ENSMUST00000200696 947 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Gm3549-201ENSMUST00000203873 794 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Gm44243-201ENSMUST00000204323 692 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC5.22□□□□□ -1.57
Cdx1P18111 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC5.22□□□□□ -1.57
Cdx1P18111 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.22□□□□□ -1.57
Cdx1P18111 AC155709.1-201ENSMUST00000218794 162 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC5.22□□□□□ -1.57
Cdx1P18111 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC5.22□□□□□ -1.57
Cdx1P18111 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.22□□□□□ -1.57
Cdx1P18111 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 AC162183.1-202ENSMUST00000225434 904 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Cdx1P18111 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Cdx1P18111 Gm5446-201ENSMUST00000091762 784 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC5.22□□□□□ -1.57
Cdx1P18111 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 AC117608.1-201ENSMUST00000225500 3418 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Cdx1P18111 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.22□□□□□ -1.57
Cdx1P18111 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Cdx1P18111 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 CT030185.2-201ENSMUST00000222614 1310 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Cdx1P18111 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Cdx1P18111 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Cdx1P18111 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Cdx1P18111 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.57
Cdx1P18111 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.21□□□□□ -1.57
Cdx1P18111 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Cdx1P18111 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.57
Cdx1P18111 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Cdx1P18111 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Cdx1P18111 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx1P18111 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.21□□□□□ -1.58
Cdx1P18111 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx1P18111 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx1P18111 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx1P18111 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Gm25379-201ENSMUST00000104338 114 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Gm8312-201ENSMUST00000119380 618 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Gm5387-201ENSMUST00000119776 857 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Gm5843-201ENSMUST00000121631 476 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Gm25505-201ENSMUST00000157220 246 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Gm26323-201ENSMUST00000157743 175 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Gm24239-201ENSMUST00000157791 255 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Gm27156-201ENSMUST00000184589 754 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Gm29156-201ENSMUST00000187764 499 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC5.21□□□□□ -1.58
Cdx1P18111 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Gm37526-201ENSMUST00000194640 619 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Gm43849-201ENSMUST00000201086 215 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Gm43926-201ENSMUST00000203978 430 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Gm44277-201ENSMUST00000205128 649 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Gm4587-201ENSMUST00000209135 637 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Gm45497-201ENSMUST00000211701 740 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 AC069561.1-201ENSMUST00000213750 424 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 AC124778.1-201ENSMUST00000216013 162 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 AC125117.2-201ENSMUST00000228344 1140 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Cdx1P18111 Gm24036-201ENSMUST00000082868 156 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Gm7731-201ENSMUST00000091759 470 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx1P18111 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Cdx1P18111 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx1P18111 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.21□□□□□ -1.58
Cdx1P18111 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
Cdx1P18111 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Cdx1P18111 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx1P18111 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Cdx1P18111 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Cdx1P18111 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdx1P18111 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC5.21□□□□□ -1.58
Cdx1P18111 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 127.4 ms