Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Ptbp3-210ENSMUST00000173699 2721 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Zfp74-201ENSMUST00000032797 2040 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Olfr1347-202ENSMUST00000207339 1737 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm37663-201ENSMUST00000191887 2299 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Il1rl1-203ENSMUST00000173514 2661 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Acad12-201ENSMUST00000041252 3881 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Chrna1-201ENSMUST00000028515 4386 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 A830036E02Rik-204ENSMUST00000139095 3413 ntTSL 2 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm22934-201ENSMUST00000103961 132 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm15709-201ENSMUST00000118354 213 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm8644-201ENSMUST00000118619 596 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm22534-201ENSMUST00000158173 104 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm22361-201ENSMUST00000158435 176 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Pitpnm2os2-202ENSMUST00000162577 744 ntTSL 3 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm26426-201ENSMUST00000177866 123 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm26060-201ENSMUST00000180094 123 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm29197-201ENSMUST00000185922 702 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm29105-201ENSMUST00000187256 450 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm10193-201ENSMUST00000188288 231 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm29517-201ENSMUST00000190744 351 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm42667-201ENSMUST00000196132 234 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm43892-201ENSMUST00000204373 265 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 AC132954.1-201ENSMUST00000221017 342 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 AC168059.1-201ENSMUST00000225846 841 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm10155-201ENSMUST00000084598 483 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm5681-201ENSMUST00000189217 1533 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm2098-201ENSMUST00000189146 1763 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm12834-201ENSMUST00000121855 2829 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Dkc1-201ENSMUST00000033776 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Spef2-205ENSMUST00000162780 1639 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm10727-201ENSMUST00000197107 1602 ntBASIC6.28□□□□□ -1.4
Hoxd3P09027 Cep41-201ENSMUST00000031810 3447 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxd3P09027 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxd3P09027 Srp72-201ENSMUST00000101087 3625 ntAPPRIS P2 TSL 2 BASIC6.27□□□□□ -1.4
Hoxd3P09027 Cyp19a1-203ENSMUST00000215736 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.4
Hoxd3P09027 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Tnfrsf10b-201ENSMUST00000022663 3179 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Zfp866-201ENSMUST00000131784 2680 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms