Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 AC164433.1-201ENSMUST00000226138 1544 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm37959-201ENSMUST00000191700 2897 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 AC158686.1-201ENSMUST00000218068 2332 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm22934-201ENSMUST00000103961 132 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm22091-201ENSMUST00000116908 127 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm13130-201ENSMUST00000119195 1166 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm15842-201ENSMUST00000120513 618 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm14489-201ENSMUST00000120868 901 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm6373-201ENSMUST00000121026 360 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm5578-201ENSMUST00000121490 1236 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm26480-201ENSMUST00000122619 297 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm371-201ENSMUST00000142240 1245 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm2892-201ENSMUST00000145537 711 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm25721-201ENSMUST00000157496 171 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm22424-201ENSMUST00000158527 87 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm16531-201ENSMUST00000180658 967 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm1972-201ENSMUST00000181606 964 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm5835-201ENSMUST00000185806 1270 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm20561-201ENSMUST00000188131 292 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm20811-201ENSMUST00000190500 553 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm18407-201ENSMUST00000192126 790 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm18952-201ENSMUST00000194471 846 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm44721-201ENSMUST00000206978 472 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm7495-201ENSMUST00000215099 426 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm17875-201ENSMUST00000216005 941 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm18997-201ENSMUST00000216353 822 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 CT009733.1-201ENSMUST00000225322 425 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm25004-201ENSMUST00000083811 161 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm24696-201ENSMUST00000083878 134 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm37326-201ENSMUST00000192828 3071 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm3089-201ENSMUST00000200804 1395 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm3302-201ENSMUST00000201462 1395 ntBASIC7.06□□□□□ -1.28
Trim39Q9ESN2 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim39Q9ESN2 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms