Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm20770-201ENSMUST00000193474 694 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm17824-201ENSMUST00000197690 805 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm7463-201ENSMUST00000201541 547 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm4510-201ENSMUST00000218265 427 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scrt1Q99M85 AL713985.1-201ENSMUST00000219030 420 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm17849-201ENSMUST00000219788 853 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm45061-201ENSMUST00000204395 2095 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm42975-201ENSMUST00000200612 1491 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scrt1Q99M85 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gm13451-201ENSMUST00000117649 592 ntBASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gm11976-201ENSMUST00000119236 295 ntBASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gm14938-201ENSMUST00000119482 943 ntBASIC5.62□□□□□ -1.51
Scrt1Q99M85 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gm14457-201ENSMUST00000148069 1161 ntBASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gm27152-201ENSMUST00000183828 99 ntBASIC5.62□□□□□ -1.51
Scrt1Q99M85 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gm43215-201ENSMUST00000199108 252 ntBASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gm45122-201ENSMUST00000206376 784 ntBASIC5.62□□□□□ -1.51
Scrt1Q99M85 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.62□□□□□ -1.51
Scrt1Q99M85 AC132446.1-201ENSMUST00000222655 226 ntBASIC5.62□□□□□ -1.51
Scrt1Q99M85 AC163660.1-201ENSMUST00000223696 818 ntBASIC5.62□□□□□ -1.51
Scrt1Q99M85 AV026068-216ENSMUST00000223874 328 ntBASIC5.62□□□□□ -1.51
Scrt1Q99M85 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gm24405-201ENSMUST00000083033 167 ntBASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gm9519-201ENSMUST00000206108 1337 ntBASIC5.62□□□□□ -1.51
Scrt1Q99M85 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Scrt1Q99M85 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm25917-201ENSMUST00000104267 130 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm26422-201ENSMUST00000104276 132 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm8424-201ENSMUST00000117716 988 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm11318-201ENSMUST00000118640 961 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm13455-201ENSMUST00000118767 517 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm15149-201ENSMUST00000119370 360 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms