Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Syne4Q8CII8 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm10693-201ENSMUST00000144146 2037 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm38368-201ENSMUST00000193181 1335 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm37783-201ENSMUST00000192025 1856 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm37457-201ENSMUST00000193639 2433 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm3883-201ENSMUST00000098119 3229 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm11984-201ENSMUST00000118142 766 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm14796-201ENSMUST00000121216 959 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm25445-201ENSMUST00000158996 299 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Olfr331-202ENSMUST00000170501 957 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm7713-201ENSMUST00000181201 1007 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC7.3□□□□□ -1.24
Syne4Q8CII8 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm37689-201ENSMUST00000193139 275 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm6119-201ENSMUST00000193443 1206 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm21461-201ENSMUST00000200382 863 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm45724-201ENSMUST00000213031 420 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 AC166358.9-201ENSMUST00000220653 375 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm4012-201ENSMUST00000221504 581 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC7.3□□□□□ -1.24
Syne4Q8CII8 AC122034.1-201ENSMUST00000227641 595 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 AC151902.1-201ENSMUST00000227800 375 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Syne4Q8CII8 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm37078-201ENSMUST00000193314 2009 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gm44185-201ENSMUST00000204539 3307 ntBASIC7.3□□□□□ -1.24
Syne4Q8CII8 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
Syne4Q8CII8 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Syne4Q8CII8 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.29□□□□□ -1.24
Syne4Q8CII8 Gm14457-201ENSMUST00000148069 1161 ntBASIC7.29□□□□□ -1.24
Syne4Q8CII8 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Gm25013-201ENSMUST00000158402 128 ntBASIC7.29□□□□□ -1.24
Syne4Q8CII8 Gm6472-201ENSMUST00000178147 651 ntBASIC7.29□□□□□ -1.24
Syne4Q8CII8 Mir8097-201ENSMUST00000185150 119 ntBASIC7.29□□□□□ -1.24
Syne4Q8CII8 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Gm18330-201ENSMUST00000199246 547 ntBASIC7.29□□□□□ -1.24
Syne4Q8CII8 Gm44607-201ENSMUST00000205611 1090 ntBASIC7.29□□□□□ -1.24
Syne4Q8CII8 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Syne4Q8CII8 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC7.29□□□□□ -1.24
Syne4Q8CII8 AC140409.4-201ENSMUST00000215757 538 ntBASIC7.29□□□□□ -1.24
Syne4Q8CII8 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Syne4Q8CII8 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Syne4Q8CII8 AC154595.2-201ENSMUST00000225067 310 ntBASIC7.29□□□□□ -1.24
Syne4Q8CII8 AC140288.1-201ENSMUST00000226329 503 ntBASIC7.29□□□□□ -1.24
Syne4Q8CII8 AC164597.1-201ENSMUST00000226538 514 ntBASIC7.29□□□□□ -1.24
Syne4Q8CII8 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC7.29□□□□□ -1.24
Syne4Q8CII8 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Syne4Q8CII8 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Syne4Q8CII8 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms