Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC8.81□□□□□ -1
Usp40Q8BWR4 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp40Q8BWR4 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
Usp40Q8BWR4 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usp40Q8BWR4 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Usp40Q8BWR4 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Usp40Q8BWR4 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Usp40Q8BWR4 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Usp40Q8BWR4 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usp40Q8BWR4 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC8.81□□□□□ -1
Usp40Q8BWR4 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Usp40Q8BWR4 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC8.81□□□□□ -1
Usp40Q8BWR4 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp40Q8BWR4 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usp40Q8BWR4 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usp40Q8BWR4 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC8.81□□□□□ -1
Usp40Q8BWR4 Ighv5-3-201ENSMUST00000195336 322 ntBASIC8.81□□□□□ -1
Usp40Q8BWR4 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC8.81□□□□□ -1
Usp40Q8BWR4 Gm8920-201ENSMUST00000196153 924 ntBASIC8.81□□□□□ -1
Usp40Q8BWR4 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Usp40Q8BWR4 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC8.81□□□□□ -1
Usp40Q8BWR4 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC8.81□□□□□ -1
Usp40Q8BWR4 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC8.81□□□□□ -1
Usp40Q8BWR4 AC158392.1-201ENSMUST00000223720 1069 ntBASIC8.81□□□□□ -1
Usp40Q8BWR4 AC173482.3-201ENSMUST00000225492 1212 ntBASIC8.81□□□□□ -1
Usp40Q8BWR4 AC105407.1-201ENSMUST00000225684 614 ntBASIC8.81□□□□□ -1
Usp40Q8BWR4 AC166574.3-201ENSMUST00000226725 367 ntBASIC8.81□□□□□ -1
Usp40Q8BWR4 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC8.81□□□□□ -1
Usp40Q8BWR4 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC8.81□□□□□ -1
Usp40Q8BWR4 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp40Q8BWR4 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Usp40Q8BWR4 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Usp40Q8BWR4 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Usp40Q8BWR4 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC8.81□□□□□ -1
Usp40Q8BWR4 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp40Q8BWR4 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp40Q8BWR4 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usp40Q8BWR4 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp40Q8BWR4 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC8.81□□□□□ -1
Usp40Q8BWR4 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usp40Q8BWR4 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Usp40Q8BWR4 AC098728.1-202ENSMUST00000226656 2198 ntBASIC8.8□□□□□ -1
Usp40Q8BWR4 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usp40Q8BWR4 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Usp40Q8BWR4 AC158537.1-201ENSMUST00000224637 1711 ntBASIC8.8□□□□□ -1
Usp40Q8BWR4 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usp40Q8BWR4 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC8.8□□□□□ -1
Usp40Q8BWR4 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usp40Q8BWR4 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usp40Q8BWR4 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usp40Q8BWR4 Gm33167-201ENSMUST00000201933 2643 ntBASIC8.8□□□□□ -1
Usp40Q8BWR4 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC8.8□□□□□ -1
Usp40Q8BWR4 Gm12937-201ENSMUST00000118333 448 ntBASIC8.8□□□□□ -1
Usp40Q8BWR4 Gm15332-201ENSMUST00000118386 357 ntBASIC8.8□□□□□ -1
Usp40Q8BWR4 Gm24733-201ENSMUST00000158863 253 ntBASIC8.8□□□□□ -1
Usp40Q8BWR4 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Usp40Q8BWR4 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC8.8□□□□□ -1
Usp40Q8BWR4 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC8.8□□□□□ -1
Usp40Q8BWR4 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usp40Q8BWR4 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
Usp40Q8BWR4 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usp40Q8BWR4 Gm7570-201ENSMUST00000215246 698 ntBASIC8.8□□□□□ -1
Usp40Q8BWR4 AC159886.1-201ENSMUST00000217099 1091 ntBASIC8.8□□□□□ -1
Usp40Q8BWR4 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC8.8□□□□□ -1
Usp40Q8BWR4 AC164597.2-201ENSMUST00000226738 603 ntBASIC8.8□□□□□ -1
Usp40Q8BWR4 AC122251.2-201ENSMUST00000227341 603 ntBASIC8.8□□□□□ -1
Usp40Q8BWR4 AC166105.1-201ENSMUST00000227512 482 ntBASIC8.8□□□□□ -1
Usp40Q8BWR4 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC8.8□□□□□ -1
Usp40Q8BWR4 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC8.8□□□□□ -1
Usp40Q8BWR4 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usp40Q8BWR4 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Usp40Q8BWR4 Gm12388-201ENSMUST00000119112 1887 ntBASIC8.8□□□□□ -1
Usp40Q8BWR4 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usp40Q8BWR4 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC8.8□□□□□ -1
Usp40Q8BWR4 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usp40Q8BWR4 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Usp40Q8BWR4 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usp40Q8BWR4 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC8.79□□□□□ -1
Usp40Q8BWR4 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usp40Q8BWR4 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC8.79□□□□□ -1
Usp40Q8BWR4 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm44215-201ENSMUST00000204910 2711 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm42975-201ENSMUST00000200612 1491 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Usp40Q8BWR4 AC164978.1-201ENSMUST00000228608 4011 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm37864-201ENSMUST00000195308 3075 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm11318-201ENSMUST00000118640 961 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm11245-201ENSMUST00000119419 1037 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm15781-201ENSMUST00000120216 323 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm7931-201ENSMUST00000121537 271 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC8.79□□□□□ -1
Usp40Q8BWR4 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm6918-201ENSMUST00000167622 1222 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm17198-201ENSMUST00000171792 1154 ntBASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms