Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm13114-201ENSMUST00000117605 106 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm12229-201ENSMUST00000120487 468 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm37621-201ENSMUST00000194716 5531 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm17824-201ENSMUST00000197690 805 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm5717-201ENSMUST00000198243 1062 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm43176-201ENSMUST00000199653 2989 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm3321-201ENSMUST00000200603 1129 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm42799-201ENSMUST00000201331 328 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm2040-201ENSMUST00000202979 289 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm33312-201ENSMUST00000222443 332 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm5612-201ENSMUST00000053326 375 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Nkx3-1P97436 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.55□□□□□ -1.52
Nkx3-1P97436 AC139754.2-201ENSMUST00000218037 1455 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm43876-201ENSMUST00000203831 3229 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm43557-201ENSMUST00000197100 2370 ntBASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Nkx3-1P97436 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm45297-201ENSMUST00000209893 3483 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm38263-201ENSMUST00000195879 3059 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Nkx3-1P97436 AC135119.1-204ENSMUST00000228036 2663 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm45061-201ENSMUST00000204395 2095 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx3-1P97436 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm23739-201ENSMUST00000102295 108 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm16511-201ENSMUST00000120019 564 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm3076-201ENSMUST00000161613 451 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm18833-201ENSMUST00000173218 862 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm9529-201ENSMUST00000177598 579 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm6055-201ENSMUST00000180532 378 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm27460-201ENSMUST00000184213 100 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm27970-201ENSMUST00000184854 407 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Mir6361-201ENSMUST00000185079 101 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm28934-201ENSMUST00000186491 346 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm6693-201ENSMUST00000189583 813 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm44312-201ENSMUST00000203536 469 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm44239-201ENSMUST00000204228 271 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 AC165106.1-201ENSMUST00000227580 408 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Nkx3-1P97436 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm37347-201ENSMUST00000193969 3071 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx3-1P97436 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx3-1P97436 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx3-1P97436 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx3-1P97436 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nkx3-1P97436 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Nkx3-1P97436 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nkx3-1P97436 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Nkx3-1P97436 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Nkx3-1P97436 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.53□□□□□ -1.52
Nkx3-1P97436 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms