Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.67□□□□□ -1.5
Cldn18P56857 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cldn18P56857 AC099760.1-201ENSMUST00000196300 153 ntBASIC5.67□□□□□ -1.5
Cldn18P56857 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.67□□□□□ -1.5
Cldn18P56857 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.67□□□□□ -1.5
Cldn18P56857 Gm44075-201ENSMUST00000204208 216 ntBASIC5.67□□□□□ -1.5
Cldn18P56857 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC5.67□□□□□ -1.5
Cldn18P56857 Gm44487-201ENSMUST00000205145 325 ntBASIC5.67□□□□□ -1.5
Cldn18P56857 Gm44538-201ENSMUST00000205615 348 ntBASIC5.67□□□□□ -1.5
Cldn18P56857 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.67□□□□□ -1.5
Cldn18P56857 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC5.67□□□□□ -1.5
Cldn18P56857 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cldn18P56857 Gm9293-201ENSMUST00000223096 306 ntBASIC5.67□□□□□ -1.5
Cldn18P56857 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.67□□□□□ -1.5
Cldn18P56857 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cldn18P56857 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cldn18P56857 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cldn18P56857 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cldn18P56857 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cldn18P56857 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.67□□□□□ -1.5
Cldn18P56857 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cldn18P56857 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Cldn18P56857 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC5.67□□□□□ -1.5
Cldn18P56857 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Cldn18P56857 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cldn18P56857 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cldn18P56857 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cldn18P56857 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.67□□□□□ -1.5
Cldn18P56857 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cldn18P56857 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Dcdc5-202ENSMUST00000122388 4957 ntBASIC5.66□□□□□ -1.5
Cldn18P56857 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Cldn18P56857 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cldn18P56857 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Gm13400-201ENSMUST00000117436 380 ntBASIC5.66□□□□□ -1.5
Cldn18P56857 Gm15366-201ENSMUST00000118433 1019 ntBASIC5.66□□□□□ -1.5
Cldn18P56857 Gm13183-201ENSMUST00000118615 789 ntBASIC5.66□□□□□ -1.5
Cldn18P56857 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC5.66□□□□□ -1.5
Cldn18P56857 Gm13740-201ENSMUST00000120590 310 ntBASIC5.66□□□□□ -1.5
Cldn18P56857 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.66□□□□□ -1.5
Cldn18P56857 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.66□□□□□ -1.5
Cldn18P56857 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cldn18P56857 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.66□□□□□ -1.5
Cldn18P56857 Gm5260-201ENSMUST00000186157 949 ntBASIC5.66□□□□□ -1.5
Cldn18P56857 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC5.66□□□□□ -1.5
Cldn18P56857 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 BC049739-201ENSMUST00000202626 660 ntBASIC5.66□□□□□ -1.5
Cldn18P56857 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC5.66□□□□□ -1.5
Cldn18P56857 Gm18955-201ENSMUST00000223173 649 ntBASIC5.66□□□□□ -1.5
Cldn18P56857 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.66□□□□□ -1.5
Cldn18P56857 Gm5436-201ENSMUST00000058103 643 ntBASIC5.66□□□□□ -1.5
Cldn18P56857 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
Cldn18P56857 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.66□□□□□ -1.5
Cldn18P56857 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cldn18P56857 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cldn18P56857 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Cldn18P56857 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Cldn18P56857 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cldn18P56857 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cldn18P56857 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cldn18P56857 AC161247.1-201ENSMUST00000217744 2295 ntBASIC5.65□□□□□ -1.5
Cldn18P56857 Wnk1-218ENSMUST00000161512 1426 ntBASIC5.65□□□□□ -1.5
Cldn18P56857 Gm38322-201ENSMUST00000194074 2300 ntBASIC5.65□□□□□ -1.5
Cldn18P56857 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cldn18P56857 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Cldn18P56857 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cldn18P56857 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC5.65□□□□□ -1.5
Cldn18P56857 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cldn18P56857 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.65□□□□□ -1.5
Cldn18P56857 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC5.65□□□□□ -1.5
Cldn18P56857 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cldn18P56857 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC5.65□□□□□ -1.5
Cldn18P56857 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cldn18P56857 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cldn18P56857 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cldn18P56857 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.65□□□□□ -1.5
Cldn18P56857 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cldn18P56857 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC5.65□□□□□ -1.5
Cldn18P56857 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Cldn18P56857 Gm26046-201ENSMUST00000157312 166 ntBASIC5.65□□□□□ -1.5
Cldn18P56857 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms