Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm8502-201ENSMUST00000185708 901 ntBASIC6.86□□□□□ -1.31
NcanP55066 Gm21147-201ENSMUST00000186046 913 ntBASIC6.86□□□□□ -1.31
NcanP55066 Gm43148-201ENSMUST00000198237 520 ntBASIC6.86□□□□□ -1.31
NcanP55066 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.86□□□□□ -1.31
NcanP55066 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC6.86□□□□□ -1.31
NcanP55066 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.86□□□□□ -1.31
NcanP55066 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC6.86□□□□□ -1.31
NcanP55066 Gm45473-201ENSMUST00000211452 616 ntBASIC6.86□□□□□ -1.31
NcanP55066 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.86□□□□□ -1.31
NcanP55066 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC6.86□□□□□ -1.31
NcanP55066 AC123665.6-201ENSMUST00000228568 538 ntBASIC6.86□□□□□ -1.31
NcanP55066 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
NcanP55066 Gm25682-201ENSMUST00000083942 164 ntBASIC6.86□□□□□ -1.31
NcanP55066 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.86□□□□□ -1.31
NcanP55066 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
NcanP55066 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NcanP55066 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NcanP55066 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
NcanP55066 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
NcanP55066 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NcanP55066 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NcanP55066 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NcanP55066 Gm18852-201ENSMUST00000184149 3593 ntBASIC6.86□□□□□ -1.31
NcanP55066 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
NcanP55066 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
NcanP55066 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
NcanP55066 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.86□□□□□ -1.31
NcanP55066 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NcanP55066 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NcanP55066 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NcanP55066 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
NcanP55066 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.85□□□□□ -1.31
NcanP55066 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC6.85□□□□□ -1.31
NcanP55066 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
NcanP55066 Gm42490-201ENSMUST00000198595 2064 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gm22103-201ENSMUST00000116733 121 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gm26475-201ENSMUST00000116769 121 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gm23620-201ENSMUST00000116812 121 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gm25042-201ENSMUST00000116856 121 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gm25540-201ENSMUST00000116880 121 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gm13679-201ENSMUST00000118678 484 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gm13473-201ENSMUST00000119289 367 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC6.85□□□□□ -1.31
NcanP55066 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.85□□□□□ -1.31
NcanP55066 Gm17086-201ENSMUST00000171346 484 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gm23550-201ENSMUST00000179003 121 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gm25123-201ENSMUST00000179154 121 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gm25353-201ENSMUST00000179366 121 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gm22992-201ENSMUST00000179496 121 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gm25892-201ENSMUST00000179867 121 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gm24092-201ENSMUST00000180257 121 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gm26731-201ENSMUST00000180683 543 ntBASIC6.85□□□□□ -1.31
NcanP55066 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC6.85□□□□□ -1.31
NcanP55066 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 Gm36448-201ENSMUST00000199916 438 ntBASIC6.85□□□□□ -1.31
NcanP55066 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gm44683-201ENSMUST00000209088 484 ntBASIC6.85□□□□□ -1.31
NcanP55066 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
NcanP55066 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.85□□□□□ -1.31
NcanP55066 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.85□□□□□ -1.31
NcanP55066 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
NcanP55066 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
NcanP55066 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
NcanP55066 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.85□□□□□ -1.31
NcanP55066 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
NcanP55066 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
NcanP55066 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
NcanP55066 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC6.85□□□□□ -1.31
NcanP55066 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.85□□□□□ -1.31
NcanP55066 Gm18194-202ENSMUST00000210952 3442 ntBASIC6.85□□□□□ -1.31
NcanP55066 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NcanP55066 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
NcanP55066 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
NcanP55066 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.84□□□□□ -1.31
NcanP55066 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NcanP55066 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.84□□□□□ -1.31
NcanP55066 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NcanP55066 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
NcanP55066 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NcanP55066 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms