Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm23452-201ENSMUST00000083327 107 ntBASIC7.65□□□□□ -1.18
Sox18P43680 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Sox18P43680 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Sox18P43680 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Sox18P43680 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Sox18P43680 Trappc12-202ENSMUST00000168129 3230 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Sox18P43680 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Sox18P43680 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC7.65□□□□□ -1.19
Sox18P43680 Zfp677-202ENSMUST00000162659 2917 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Sox18P43680 Rpgr-203ENSMUST00000073392 2926 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
Sox18P43680 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
Sox18P43680 Ppwd1-201ENSMUST00000022226 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox18P43680 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox18P43680 AC121997.2-201ENSMUST00000228095 2294 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
Sox18P43680 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Sox18P43680 Gm18637-201ENSMUST00000217665 1900 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Sox18P43680 Fam90a1a-201ENSMUST00000110741 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox18P43680 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Sox18P43680 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Sox18P43680 Gm12919-201ENSMUST00000119855 1594 ntBASIC7.64□□□□□ -1.19
Sox18P43680 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC7.64□□□□□ -1.19
Sox18P43680 Olfr1350-202ENSMUST00000207221 1521 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
Sox18P43680 Tcaim-201ENSMUST00000052740 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox18P43680 Gm26748-201ENSMUST00000180406 2972 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Sox18P43680 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox18P43680 Gm336-201ENSMUST00000186376 1480 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox18P43680 AC136986.2-201ENSMUST00000220880 2944 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Zfp940-201ENSMUST00000085792 2764 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox18P43680 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox18P43680 Gm25631-201ENSMUST00000104390 130 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Gm14793-201ENSMUST00000118739 311 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Gm13245-201ENSMUST00000119646 260 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Gm12773-201ENSMUST00000120134 587 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Gm11252-201ENSMUST00000120572 939 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Gm12307-201ENSMUST00000120581 590 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Gm25806-201ENSMUST00000122782 122 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Sox18P43680 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC7.64□□□□□ -1.19
Sox18P43680 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC7.64□□□□□ -1.19
Sox18P43680 Gm5541-201ENSMUST00000193248 1113 ntBASIC7.64□□□□□ -1.19
Sox18P43680 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC7.64□□□□□ -1.19
Sox18P43680 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC7.64□□□□□ -1.19
Sox18P43680 Ighv1-79-201ENSMUST00000200152 350 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Gm4742-201ENSMUST00000200261 771 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC7.64□□□□□ -1.19
Sox18P43680 Gm44060-201ENSMUST00000204440 410 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Gm36849-201ENSMUST00000210345 680 ntTSL 2 BASIC7.64□□□□□ -1.19
Sox18P43680 Gm8748-201ENSMUST00000211125 587 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC7.64□□□□□ -1.19
Sox18P43680 AC117949.1-201ENSMUST00000225547 419 ntBASIC7.64□□□□□ -1.19
Sox18P43680 AC154249.1-201ENSMUST00000226296 320 ntBASIC7.64□□□□□ -1.19
Sox18P43680 AC106830.2-201ENSMUST00000226624 943 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Gm26072-201ENSMUST00000083135 107 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Gm25189-201ENSMUST00000083911 164 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox18P43680 Golga1-201ENSMUST00000039165 4869 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox18P43680 Gm8822-201ENSMUST00000118948 2347 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Calhm2-202ENSMUST00000140512 3377 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Sox18P43680 Csf3r-201ENSMUST00000030673 3160 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Sox18P43680 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Sox18P43680 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Sox18P43680 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Sox18P43680 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Sox18P43680 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox18P43680 Hrh1-203ENSMUST00000160780 2782 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Sox18P43680 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Sox18P43680 Gm42568-201ENSMUST00000195639 1841 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Gm44249-201ENSMUST00000204538 1805 ntBASIC7.64□□□□□ -1.19
Sox18P43680 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox18P43680 Hnrnpk-205ENSMUST00000176207 2653 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Sox18P43680 Zscan26-202ENSMUST00000110485 4366 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Sox18P43680 A830036E02Rik-204ENSMUST00000139095 3413 ntTSL 2 BASIC7.64□□□□□ -1.19
Sox18P43680 Frk-202ENSMUST00000170771 3406 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Sox18P43680 Arl6-201ENSMUST00000023405 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox18P43680 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox18P43680 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Sox18P43680 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Sox18P43680 Gm43686-201ENSMUST00000197351 2439 ntBASIC7.63□□□□□ -1.19
Sox18P43680 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox18P43680 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Sox18P43680 Tmem209-203ENSMUST00000115157 2273 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox18P43680 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox18P43680 CT009515.4-201ENSMUST00000228165 1494 ntBASIC7.63□□□□□ -1.19
Sox18P43680 Olfr97-203ENSMUST00000213328 2168 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Sox18P43680 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.63□□□□□ -1.19
Sox18P43680 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Sox18P43680 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC7.63□□□□□ -1.19
Sox18P43680 Gm18878-201ENSMUST00000223071 1443 ntBASIC7.63□□□□□ -1.19
Sox18P43680 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox18P43680 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Sox18P43680 Naalad2-204ENSMUST00000166825 2799 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox18P43680 Tcf23-201ENSMUST00000006818 4116 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox18P43680 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox18P43680 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Sox18P43680 Btbd16-201ENSMUST00000048453 3434 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms