Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd1P40201 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd1P40201 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd1P40201 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chd1P40201 Anapc1-201ENSMUST00000014499 8942 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd1P40201 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC9.39□□□□□ -0.91
Chd1P40201 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Chd1P40201 Gm43537-201ENSMUST00000199064 3110 ntBASIC9.39□□□□□ -0.91
Chd1P40201 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chd1P40201 Gm18852-201ENSMUST00000184149 3593 ntBASIC9.39□□□□□ -0.91
Chd1P40201 Olfr1276-203ENSMUST00000218065 5052 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Chd1P40201 Zbtb34-201ENSMUST00000091037 6510 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd1P40201 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd1P40201 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC9.39□□□□□ -0.91
Chd1P40201 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chd1P40201 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC9.39□□□□□ -0.91
Chd1P40201 Gm29755-201ENSMUST00000196976 948 ntBASIC9.39□□□□□ -0.91
Chd1P40201 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC9.39□□□□□ -0.91
Chd1P40201 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC9.39□□□□□ -0.91
Chd1P40201 Gm45082-201ENSMUST00000206082 601 ntBASIC9.39□□□□□ -0.91
Chd1P40201 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC9.39□□□□□ -0.91
Chd1P40201 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Chd1P40201 Ccdc180-204ENSMUST00000178561 5081 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Chd1P40201 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Chd1P40201 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Chd1P40201 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC9.39□□□□□ -0.91
Chd1P40201 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Chd1P40201 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 Gm42873-201ENSMUST00000196110 1726 ntBASIC9.38□□□□□ -0.91
Chd1P40201 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC9.38□□□□□ -0.91
Chd1P40201 Gm8185-201ENSMUST00000160999 669 ntBASIC9.38□□□□□ -0.91
Chd1P40201 Gm8358-201ENSMUST00000167222 555 ntBASIC9.38□□□□□ -0.91
Chd1P40201 Gm20674-201ENSMUST00000177452 369 ntBASIC9.38□□□□□ -0.91
Chd1P40201 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC9.38□□□□□ -0.91
Chd1P40201 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC9.38□□□□□ -0.91
Chd1P40201 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC9.38□□□□□ -0.91
Chd1P40201 Ighv1-35-201ENSMUST00000195265 351 ntBASIC9.38□□□□□ -0.91
Chd1P40201 Gm9238-201ENSMUST00000196181 329 ntBASIC9.38□□□□□ -0.91
Chd1P40201 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC9.38□□□□□ -0.91
Chd1P40201 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC9.38□□□□□ -0.91
Chd1P40201 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Chd1P40201 Prdm16-204ENSMUST00000105636 8426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 Gm43750-201ENSMUST00000199027 2493 ntBASIC9.38□□□□□ -0.91
Chd1P40201 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC9.38□□□□□ -0.91
Chd1P40201 Gm42436-201ENSMUST00000198804 3656 ntBASIC9.38□□□□□ -0.91
Chd1P40201 AC152922.2-201ENSMUST00000213353 3879 ntBASIC9.38□□□□□ -0.91
Chd1P40201 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Chd1P40201 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chd1P40201 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Chd1P40201 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd1P40201 Gm10062-201ENSMUST00000072180 1470 ntBASIC9.37□□□□□ -0.91
Chd1P40201 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd1P40201 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd1P40201 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd1P40201 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd1P40201 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd1P40201 Gm25383-201ENSMUST00000157810 144 ntBASIC9.37□□□□□ -0.91
Chd1P40201 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC9.37□□□□□ -0.91
Chd1P40201 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC9.37□□□□□ -0.91
Chd1P40201 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Chd1P40201 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Chd1P40201 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd1P40201 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC9.37□□□□□ -0.91
Chd1P40201 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC9.37□□□□□ -0.91
Chd1P40201 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd1P40201 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd1P40201 Gm8750-201ENSMUST00000173278 1537 ntBASIC9.37□□□□□ -0.91
Chd1P40201 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd1P40201 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd1P40201 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC9.37□□□□□ -0.91
Chd1P40201 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd1P40201 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Chd1P40201 Gm12874-201ENSMUST00000117190 913 ntBASIC9.36□□□□□ -0.91
Chd1P40201 Gm6067-201ENSMUST00000121648 491 ntBASIC9.36□□□□□ -0.91
Chd1P40201 Gm27820-201ENSMUST00000183628 175 ntBASIC9.36□□□□□ -0.91
Chd1P40201 Gm6520-201ENSMUST00000200636 410 ntBASIC9.36□□□□□ -0.91
Chd1P40201 Gm44219-201ENSMUST00000203005 273 ntBASIC9.36□□□□□ -0.91
Chd1P40201 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC9.36□□□□□ -0.91
Chd1P40201 Gm18689-201ENSMUST00000203969 902 ntBASIC9.36□□□□□ -0.91
Chd1P40201 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd1P40201 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Chd1P40201 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd1P40201 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Chd1P40201 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms