Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC7.47□□□□□ -1.21
Traf1P39428 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC7.47□□□□□ -1.21
Traf1P39428 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.47□□□□□ -1.21
Traf1P39428 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
Traf1P39428 Gm6074-201ENSMUST00000193340 451 ntBASIC7.47□□□□□ -1.21
Traf1P39428 Gm43354-201ENSMUST00000196862 346 ntBASIC7.47□□□□□ -1.21
Traf1P39428 Gm18805-201ENSMUST00000206872 655 ntBASIC7.47□□□□□ -1.21
Traf1P39428 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC7.47□□□□□ -1.21
Traf1P39428 AC154219.1-201ENSMUST00000220764 1262 ntBASIC7.47□□□□□ -1.21
Traf1P39428 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.47□□□□□ -1.21
Traf1P39428 AC122290.1-201ENSMUST00000225631 1078 ntBASIC7.47□□□□□ -1.21
Traf1P39428 AC139197.1-201ENSMUST00000228332 813 ntBASIC7.47□□□□□ -1.21
Traf1P39428 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC7.47□□□□□ -1.21
Traf1P39428 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Traf1P39428 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
Traf1P39428 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
Traf1P39428 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.47□□□□□ -1.21
Traf1P39428 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Traf1P39428 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Traf1P39428 Gm45786-201ENSMUST00000213021 2278 ntBASIC7.47□□□□□ -1.21
Traf1P39428 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
Traf1P39428 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
Traf1P39428 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC7.46□□□□□ -1.21
Traf1P39428 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Traf1P39428 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
Traf1P39428 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Traf1P39428 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC7.46□□□□□ -1.21
Traf1P39428 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Traf1P39428 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Traf1P39428 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Traf1P39428 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC7.46□□□□□ -1.21
Traf1P39428 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
Traf1P39428 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Traf1P39428 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Traf1P39428 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Traf1P39428 Gm25346-201ENSMUST00000104509 128 ntBASIC7.46□□□□□ -1.22
Traf1P39428 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Traf1P39428 Gm9005-201ENSMUST00000119908 607 ntBASIC7.46□□□□□ -1.22
Traf1P39428 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Traf1P39428 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC7.46□□□□□ -1.22
Traf1P39428 Gm25219-201ENSMUST00000157545 330 ntBASIC7.46□□□□□ -1.22
Traf1P39428 Gm26162-201ENSMUST00000157793 132 ntBASIC7.46□□□□□ -1.22
Traf1P39428 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Traf1P39428 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC7.46□□□□□ -1.22
Traf1P39428 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Traf1P39428 Mir3473e-201ENSMUST00000183932 110 ntBASIC7.46□□□□□ -1.22
Traf1P39428 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC7.46□□□□□ -1.22
Traf1P39428 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Traf1P39428 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC7.46□□□□□ -1.22
Traf1P39428 Igkv4-73-201ENSMUST00000199760 358 ntBASIC7.46□□□□□ -1.22
Traf1P39428 Gm44422-201ENSMUST00000204142 1025 ntBASIC7.46□□□□□ -1.22
Traf1P39428 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC7.46□□□□□ -1.22
Traf1P39428 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC7.46□□□□□ -1.22
Traf1P39428 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC7.46□□□□□ -1.22
Traf1P39428 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC7.46□□□□□ -1.22
Traf1P39428 AC104906.1-201ENSMUST00000218122 913 ntBASIC7.46□□□□□ -1.22
Traf1P39428 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC7.46□□□□□ -1.22
Traf1P39428 AC131187.2-201ENSMUST00000223936 994 ntBASIC7.46□□□□□ -1.22
Traf1P39428 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.46□□□□□ -1.22
Traf1P39428 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Traf1P39428 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
Traf1P39428 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Traf1P39428 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Traf1P39428 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC7.46□□□□□ -1.22
Traf1P39428 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Traf1P39428 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Traf1P39428 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Traf1P39428 Gm9314-201ENSMUST00000199881 1528 ntBASIC7.46□□□□□ -1.22
Traf1P39428 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Traf1P39428 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
Traf1P39428 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Traf1P39428 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Traf1P39428 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Traf1P39428 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Traf1P39428 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Traf1P39428 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC7.45□□□□□ -1.22
Traf1P39428 AC022775.1-201ENSMUST00000228163 2698 ntBASIC7.45□□□□□ -1.22
Traf1P39428 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Traf1P39428 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Traf1P39428 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC7.45□□□□□ -1.22
Traf1P39428 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Traf1P39428 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Traf1P39428 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Traf1P39428 n-R5s178-201ENSMUST00000104249 114 ntBASIC7.45□□□□□ -1.22
Traf1P39428 Gm26146-201ENSMUST00000104478 185 ntBASIC7.45□□□□□ -1.22
Traf1P39428 Gm13740-201ENSMUST00000120590 310 ntBASIC7.45□□□□□ -1.22
Traf1P39428 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC7.45□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms