Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
Cdx1P18111 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Cdx1P18111 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Cdx1P18111 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC5.24□□□□□ -1.57
Cdx1P18111 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.24□□□□□ -1.57
Cdx1P18111 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Cdx1P18111 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.24□□□□□ -1.57
Cdx1P18111 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
Cdx1P18111 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdx1P18111 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.23□□□□□ -1.57
Cdx1P18111 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC5.23□□□□□ -1.57
Cdx1P18111 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.23□□□□□ -1.57
Cdx1P18111 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Cdx1P18111 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Cdx1P18111 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.23□□□□□ -1.57
Cdx1P18111 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.23□□□□□ -1.57
Cdx1P18111 Mir708-201ENSMUST00000102189 109 ntBASIC5.23□□□□□ -1.57
Cdx1P18111 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Cdx1P18111 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Cdx1P18111 Gm22707-201ENSMUST00000103834 110 ntBASIC5.23□□□□□ -1.57
Cdx1P18111 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Cdx1P18111 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC5.23□□□□□ -1.57
Cdx1P18111 Gm12653-201ENSMUST00000117778 561 ntBASIC5.23□□□□□ -1.57
Cdx1P18111 Gm9439-201ENSMUST00000119554 973 ntBASIC5.23□□□□□ -1.57
Cdx1P18111 Gm9208-201ENSMUST00000120468 948 ntBASIC5.23□□□□□ -1.57
Cdx1P18111 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC5.23□□□□□ -1.57
Cdx1P18111 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.23□□□□□ -1.57
Cdx1P18111 Gm26353-201ENSMUST00000158224 255 ntBASIC5.23□□□□□ -1.57
Cdx1P18111 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
Cdx1P18111 Gm25617-201ENSMUST00000179548 133 ntBASIC5.23□□□□□ -1.57
Cdx1P18111 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.23□□□□□ -1.57
Cdx1P18111 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Gm36928-201ENSMUST00000192466 694 ntBASIC5.23□□□□□ -1.57
Cdx1P18111 Gm37325-201ENSMUST00000194971 694 ntBASIC5.23□□□□□ -1.57
Cdx1P18111 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.23□□□□□ -1.57
Cdx1P18111 Gm25617-202ENSMUST00000198387 132 ntBASIC5.23□□□□□ -1.57
Cdx1P18111 Gm44431-201ENSMUST00000203500 413 ntBASIC5.23□□□□□ -1.57
Cdx1P18111 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC5.23□□□□□ -1.57
Cdx1P18111 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC5.23□□□□□ -1.57
Cdx1P18111 AC123533.2-201ENSMUST00000228176 375 ntBASIC5.23□□□□□ -1.57
Cdx1P18111 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Cdx1P18111 Gm28392-201ENSMUST00000077630 393 ntBASIC5.23□□□□□ -1.57
Cdx1P18111 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
Cdx1P18111 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Cdx1P18111 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Cdx1P18111 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Cdx1P18111 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC5.23□□□□□ -1.57
Cdx1P18111 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cdx1P18111 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
Cdx1P18111 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Cdx1P18111 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.22□□□□□ -1.57
Cdx1P18111 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Cdx1P18111 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Cdx1P18111 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Cdx1P18111 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Cdx1P18111 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Cdx1P18111 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Gm44289-201ENSMUST00000204144 1390 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Cdx1P18111 Gm25877-201ENSMUST00000104326 129 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cdx1P18111 Gm22710-201ENSMUST00000116892 125 ntBASIC5.22□□□□□ -1.57
Cdx1P18111 Gm13732-201ENSMUST00000117753 535 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms