Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Col1a1P11087 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Col1a1P11087 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 Gm38029-201ENSMUST00000192669 2090 ntBASIC7.37□□□□□ -1.23
Col1a1P11087 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col1a1P11087 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Col1a1P11087 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC7.36□□□□□ -1.23
Col1a1P11087 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
Col1a1P11087 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC7.36□□□□□ -1.23
Col1a1P11087 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col1a1P11087 Gm29813-201ENSMUST00000195856 447 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 Gm43561-201ENSMUST00000199866 448 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 AC110381.1-201ENSMUST00000218987 586 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 AC154767.2-201ENSMUST00000224584 414 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 AC154806.5-205ENSMUST00000228828 411 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col1a1P11087 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Col1a1P11087 Gm23330-201ENSMUST00000082660 164 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 Gm22300-201ENSMUST00000082661 126 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Col1a1P11087 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Col1a1P11087 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
Col1a1P11087 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col1a1P11087 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col1a1P11087 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col1a1P11087 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col1a1P11087 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col1a1P11087 Gm9403-201ENSMUST00000196299 2181 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 AC138765.2-202ENSMUST00000228418 3435 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Col1a1P11087 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC7.36□□□□□ -1.23
Col1a1P11087 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Col1a1P11087 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col1a1P11087 Gm6101-201ENSMUST00000195384 1867 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col1a1P11087 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC7.36□□□□□ -1.23
Col1a1P11087 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 Gm12936-201ENSMUST00000121439 301 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 Gm15096-201ENSMUST00000121918 878 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC7.36□□□□□ -1.23
Col1a1P11087 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC7.36□□□□□ -1.23
Col1a1P11087 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col1a1P11087 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC7.36□□□□□ -1.23
Col1a1P11087 Gm8323-201ENSMUST00000168436 1201 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 Mir3110-201ENSMUST00000175053 80 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 Gm2877-201ENSMUST00000178248 1204 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 Gm8324-201ENSMUST00000178911 1204 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 Gm2871-201ENSMUST00000179984 1204 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col1a1P11087 Gm43724-201ENSMUST00000197516 226 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 Mir219c-201ENSMUST00000199860 60 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 Gm43946-201ENSMUST00000204058 886 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 Gm44940-201ENSMUST00000206225 1247 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC7.36□□□□□ -1.23
Col1a1P11087 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC7.36□□□□□ -1.23
Col1a1P11087 AC168056.2-201ENSMUST00000223591 269 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 AC154556.1-201ENSMUST00000224587 885 ntBASIC7.36□□□□□ -1.23
Col1a1P11087 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col1a1P11087 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col1a1P11087 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Col1a1P11087 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC7.36□□□□□ -1.23
Col1a1P11087 Gm43258-201ENSMUST00000200312 1950 ntBASIC7.35□□□□□ -1.23
Col1a1P11087 CT025535.2-201ENSMUST00000228572 7441 ntBASIC7.35□□□□□ -1.23
Col1a1P11087 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Col1a1P11087 Gm43900-201ENSMUST00000204868 2669 ntBASIC7.35□□□□□ -1.23
Col1a1P11087 Gm42837-201ENSMUST00000197071 2829 ntBASIC7.35□□□□□ -1.23
Col1a1P11087 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col1a1P11087 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col1a1P11087 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col1a1P11087 Gm43769-201ENSMUST00000201871 4323 ntBASIC7.35□□□□□ -1.23
Col1a1P11087 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col1a1P11087 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col1a1P11087 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC7.35□□□□□ -1.23
Col1a1P11087 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Col1a1P11087 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col1a1P11087 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC7.35□□□□□ -1.23
Col1a1P11087 Gm23280-201ENSMUST00000157905 139 ntBASIC7.35□□□□□ -1.23
Col1a1P11087 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col1a1P11087 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC7.35□□□□□ -1.23
Col1a1P11087 Gm4617-201ENSMUST00000178993 331 ntBASIC7.35□□□□□ -1.23
Col1a1P11087 Gm8604-201ENSMUST00000183150 965 ntBASIC7.35□□□□□ -1.23
Col1a1P11087 Mir6903-201ENSMUST00000183597 88 ntBASIC7.35□□□□□ -1.23
Col1a1P11087 Gm17934-201ENSMUST00000192818 422 ntBASIC7.35□□□□□ -1.23
Col1a1P11087 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC7.35□□□□□ -1.23
Col1a1P11087 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC7.35□□□□□ -1.23
Col1a1P11087 Gm19060-201ENSMUST00000201959 421 ntBASIC7.35□□□□□ -1.23
Col1a1P11087 Gm43456-201ENSMUST00000202519 457 ntBASIC7.35□□□□□ -1.23
Col1a1P11087 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Col1a1P11087 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col1a1P11087 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms