Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxa9P09631 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.49□□□□□ -1.37
Hoxa9P09631 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxa9P09631 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxa9P09631 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxa9P09631 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Hoxa9P09631 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.49□□□□□ -1.37
Hoxa9P09631 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Hoxa9P09631 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Hoxa9P09631 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Hoxa9P09631 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm22370-201ENSMUST00000102422 83 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm22103-201ENSMUST00000116733 121 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm26475-201ENSMUST00000116769 121 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm23620-201ENSMUST00000116812 121 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm25042-201ENSMUST00000116856 121 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm25540-201ENSMUST00000116880 121 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm14712-201ENSMUST00000120195 772 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm22548-201ENSMUST00000174899 78 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Mir5107-201ENSMUST00000175586 88 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm23550-201ENSMUST00000179003 121 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm25123-201ENSMUST00000179154 121 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm25353-201ENSMUST00000179366 121 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm22992-201ENSMUST00000179496 121 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm25892-201ENSMUST00000179867 121 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm24092-201ENSMUST00000180257 121 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm7266-201ENSMUST00000187999 405 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm21461-201ENSMUST00000200382 863 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm18467-201ENSMUST00000208805 434 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Hoxa9P09631 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
Hoxa9P09631 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Hoxa9P09631 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Hoxa9P09631 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.48□□□□□ -1.37
Hoxa9P09631 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Hoxa9P09631 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
Hoxa9P09631 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxa9P09631 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxa9P09631 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
Hoxa9P09631 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.47□□□□□ -1.37
Hoxa9P09631 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxa9P09631 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxa9P09631 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxa9P09631 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxa9P09631 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
Hoxa9P09631 Gm12400-201ENSMUST00000120915 1003 ntBASIC6.47□□□□□ -1.37
Hoxa9P09631 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.47□□□□□ -1.37
Hoxa9P09631 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxa9P09631 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.47□□□□□ -1.37
Hoxa9P09631 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxa9P09631 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.47□□□□□ -1.37
Hoxa9P09631 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.47□□□□□ -1.37
Hoxa9P09631 Gm20926-201ENSMUST00000194457 696 ntBASIC6.47□□□□□ -1.37
Hoxa9P09631 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.47□□□□□ -1.37
Hoxa9P09631 Gm7780-201ENSMUST00000214787 406 ntBASIC6.47□□□□□ -1.37
Hoxa9P09631 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.47□□□□□ -1.37
Hoxa9P09631 AC120375.2-202ENSMUST00000228722 397 ntBASIC6.47□□□□□ -1.37
Hoxa9P09631 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxa9P09631 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Hoxa9P09631 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.47□□□□□ -1.37
Hoxa9P09631 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Hoxa9P09631 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Hoxa9P09631 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Hoxa9P09631 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Hoxa9P09631 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.47□□□□□ -1.37
Hoxa9P09631 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Hoxa9P09631 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Hoxa9P09631 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.47□□□□□ -1.37
Hoxa9P09631 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
Hoxa9P09631 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms