Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm11233-201ENSMUST00000122357 634 ntBASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Gm25962-201ENSMUST00000157173 168 ntBASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Gm25487-201ENSMUST00000158725 125 ntBASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Gm24735-201ENSMUST00000158859 118 ntBASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Gm4202-201ENSMUST00000169025 733 ntBASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.02□□□□□ -1.29
Trim9Q8C7M3 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Gm37517-201ENSMUST00000194004 1289 ntBASIC7.02□□□□□ -1.29
Trim9Q8C7M3 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC7.02□□□□□ -1.29
Trim9Q8C7M3 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC7.02□□□□□ -1.29
Trim9Q8C7M3 AC161250.1-201ENSMUST00000213426 1111 ntBASIC7.02□□□□□ -1.29
Trim9Q8C7M3 AC153532.1-201ENSMUST00000218126 1111 ntBASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Mir138-1-201ENSMUST00000083480 99 ntBASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 AC124414.1-201ENSMUST00000218033 2946 ntBASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Gm43719-201ENSMUST00000200088 2199 ntBASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim9Q8C7M3 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm38077-201ENSMUST00000193657 3245 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm14895-201ENSMUST00000121858 1361 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm12073-201ENSMUST00000117382 524 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm13469-201ENSMUST00000118231 350 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm14301-201ENSMUST00000120181 324 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm13460-201ENSMUST00000121274 353 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm15502-201ENSMUST00000121449 208 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm22548-201ENSMUST00000174899 78 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm24111-201ENSMUST00000175491 97 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm7804-202ENSMUST00000194187 854 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Trbv9-201ENSMUST00000194494 290 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm37477-201ENSMUST00000195215 884 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm42640-201ENSMUST00000199792 1195 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm7554-201ENSMUST00000202282 574 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm44279-201ENSMUST00000205154 472 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm7368-201ENSMUST00000213307 367 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 AC079644.2-201ENSMUST00000220581 322 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 AC164597.1-201ENSMUST00000226538 514 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 AC154640.3-201ENSMUST00000227492 846 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trim9Q8C7M3 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim9Q8C7M3 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim9Q8C7M3 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms