Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm26993-201ENSMUST00000182766 789 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm27026-201ENSMUST00000183003 892 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm38068-201ENSMUST00000192546 540 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm29848-201ENSMUST00000203107 295 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm31663-202ENSMUST00000208481 1190 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm19056-201ENSMUST00000218220 797 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 AC154576.2-203ENSMUST00000224736 253 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Rny3-201ENSMUST00000083011 102 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm37460-201ENSMUST00000191796 2249 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm12661-201ENSMUST00000118780 3335 ntBASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim47Q8C0E3 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm37706-201ENSMUST00000195379 2765 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm8916-201ENSMUST00000119732 949 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Trav8-2-201ENSMUST00000130122 337 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm17155-201ENSMUST00000165969 473 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm23639-201ENSMUST00000175078 132 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm27782-201ENSMUST00000185059 199 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm27538-201ENSMUST00000185065 294 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm18864-201ENSMUST00000194518 1051 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm26413-201ENSMUST00000196783 126 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm7285-201ENSMUST00000198801 580 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Trav3-2-201ENSMUST00000198999 305 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm36378-201ENSMUST00000201709 388 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm31861-201ENSMUST00000204563 672 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm5917-201ENSMUST00000217638 721 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 AC116460.1-201ENSMUST00000219040 313 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm5791-201ENSMUST00000220840 489 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 AC167977.1-201ENSMUST00000221384 234 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 AC159619.2-201ENSMUST00000222924 401 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 AC132590.1-201ENSMUST00000224374 1164 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm37382-201ENSMUST00000193032 1596 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Gm43534-201ENSMUST00000197685 2853 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 CT571245.1-201ENSMUST00000218642 3465 ntBASIC8.25□□□□□ -1.09
Trim47Q8C0E3 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim47Q8C0E3 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms