Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Trim35Q8C006 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Rpl21-ps12-201ENSMUST00000080061 480 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm25204-201ENSMUST00000082843 106 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Snora43-201ENSMUST00000082924 127 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm25987-201ENSMUST00000083234 107 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Ccdc116-202ENSMUST00000115709 1900 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Olfr297-202ENSMUST00000172965 1928 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Trim35Q8C006 A330076C08Rik-202ENSMUST00000223513 1937 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Gria1-202ENSMUST00000094179 5399 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm16063-201ENSMUST00000156235 1701 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Rhpn2-202ENSMUST00000085556 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Zfp169-207ENSMUST00000177530 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Sstr2-202ENSMUST00000106630 1537 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Spag8-201ENSMUST00000084646 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm37843-201ENSMUST00000195213 2639 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Katna1-202ENSMUST00000165806 1775 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Katna1-201ENSMUST00000019929 1774 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm8049-201ENSMUST00000214336 1782 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Palb2-202ENSMUST00000098068 3750 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Ank2-201ENSMUST00000044443 5775 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Map2k7-204ENSMUST00000110995 1558 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Phc2-203ENSMUST00000106080 3885 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm37999-201ENSMUST00000195178 1809 ntBASIC9.24□□□□□ -0.93
Trim35Q8C006 Myzap-204ENSMUST00000169573 1393 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trim35Q8C006 Cd101-202ENSMUST00000167086 3223 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trim35Q8C006 Gm37409-201ENSMUST00000195811 1626 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm43311-201ENSMUST00000200016 2377 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Ces1g-201ENSMUST00000044602 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Creb5-202ENSMUST00000203487 2648 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm33351-202ENSMUST00000215428 1677 ntTSL 5 BASIC9.23□□□□□ -0.93
Trim35Q8C006 Dnajc11-201ENSMUST00000062904 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Slc11a2-205ENSMUST00000138843 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm29326-201ENSMUST00000185541 2451 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm14914-201ENSMUST00000117576 2031 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm36595-201ENSMUST00000218830 2006 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Trim35Q8C006 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC9.23□□□□□ -0.93
Trim35Q8C006 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC9.23□□□□□ -0.93
Trim35Q8C006 Ap5s1-204ENSMUST00000110210 1101 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm14439-201ENSMUST00000122320 441 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm22762-201ENSMUST00000157395 137 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm22337-201ENSMUST00000157721 132 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm15970-201ENSMUST00000160623 834 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Trim35Q8C006 H2-Pb-201ENSMUST00000172731 531 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm25525-201ENSMUST00000177701 107 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm26178-201ENSMUST00000177706 107 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm26465-201ENSMUST00000178517 107 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm24317-201ENSMUST00000178536 107 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm25021-201ENSMUST00000179184 107 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm22995-201ENSMUST00000179670 107 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm24424-201ENSMUST00000179714 107 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm24389-201ENSMUST00000179962 107 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm25672-201ENSMUST00000180111 107 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm29163-201ENSMUST00000188029 107 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm18036-201ENSMUST00000195256 272 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm43957-201ENSMUST00000203606 362 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm45126-201ENSMUST00000206702 960 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Trim35Q8C006 AC154994.1-201ENSMUST00000217395 302 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm7868-201ENSMUST00000223510 680 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Tssk4-204ENSMUST00000226591 1243 ntAPPRIS ALT2 BASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm5292-201ENSMUST00000073317 580 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Rps12-201ENSMUST00000073926 490 ntTSL 5 BASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm23815-201ENSMUST00000083231 107 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm4925-201ENSMUST00000092231 397 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm23520-201ENSMUST00000093736 107 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm10689-201ENSMUST00000098864 432 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Trim35Q8C006 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Rgs9-204ENSMUST00000106706 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Zfp62-203ENSMUST00000109198 3872 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Timeless-206ENSMUST00000105245 4402 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Gm10556-201ENSMUST00000180904 3906 ntTSL 2 BASIC9.23□□□□□ -0.93
Trim35Q8C006 Adh6a-201ENSMUST00000013455 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Trim35Q8C006 Cdk12-202ENSMUST00000107538 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Chil1-208ENSMUST00000156873 1645 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Trim35Q8C006 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Trim35Q8C006 Rnf214-209ENSMUST00000161203 3294 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Kcnk2-201ENSMUST00000079451 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Rfx2-202ENSMUST00000086801 3278 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 D830044D21Rik-201ENSMUST00000143315 3897 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Dcstamp-205ENSMUST00000228556 1684 ntBASIC9.23□□□□□ -0.93
Trim35Q8C006 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 4930554H23Rik-201ENSMUST00000181327 2542 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trim35Q8C006 Pidd1-201ENSMUST00000026580 3357 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms