Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col1a1P11087 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Col1a1P11087 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col1a1P11087 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col1a1P11087 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col1a1P11087 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col1a1P11087 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Col1a1P11087 Gm15331-201ENSMUST00000120225 385 ntBASIC7.39□□□□□ -1.23
Col1a1P11087 Gm11498-201ENSMUST00000120660 949 ntBASIC7.39□□□□□ -1.23
Col1a1P11087 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col1a1P11087 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col1a1P11087 Gm25152-201ENSMUST00000157117 114 ntBASIC7.39□□□□□ -1.23
Col1a1P11087 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col1a1P11087 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC7.39□□□□□ -1.23
Col1a1P11087 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC7.39□□□□□ -1.23
Col1a1P11087 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC7.39□□□□□ -1.23
Col1a1P11087 Gm29159-201ENSMUST00000187969 379 ntBASIC7.39□□□□□ -1.23
Col1a1P11087 Gm37477-201ENSMUST00000195215 884 ntBASIC7.39□□□□□ -1.23
Col1a1P11087 Gm37358-201ENSMUST00000195492 479 ntBASIC7.39□□□□□ -1.23
Col1a1P11087 Igkv12-66-201ENSMUST00000199305 348 ntBASIC7.39□□□□□ -1.23
Col1a1P11087 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Col1a1P11087 Gm4374-201ENSMUST00000204929 424 ntBASIC7.39□□□□□ -1.23
Col1a1P11087 Gm6477-201ENSMUST00000217098 764 ntBASIC7.39□□□□□ -1.23
Col1a1P11087 Gm9293-201ENSMUST00000223096 306 ntBASIC7.39□□□□□ -1.23
Col1a1P11087 AC107711.2-203ENSMUST00000227827 762 ntBASIC7.39□□□□□ -1.23
Col1a1P11087 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col1a1P11087 Gm44045-201ENSMUST00000204906 2520 ntBASIC7.39□□□□□ -1.23
Col1a1P11087 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col1a1P11087 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC7.39□□□□□ -1.23
Col1a1P11087 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Col1a1P11087 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Col1a1P11087 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Col1a1P11087 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col1a1P11087 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col1a1P11087 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col1a1P11087 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col1a1P11087 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC7.38□□□□□ -1.23
Col1a1P11087 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col1a1P11087 Gm12077-201ENSMUST00000117049 364 ntBASIC7.38□□□□□ -1.23
Col1a1P11087 Gm13604-201ENSMUST00000119332 482 ntBASIC7.38□□□□□ -1.23
Col1a1P11087 Gm12650-201ENSMUST00000121966 258 ntBASIC7.38□□□□□ -1.23
Col1a1P11087 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC7.38□□□□□ -1.23
Col1a1P11087 Gm4764-201ENSMUST00000130207 1233 ntBASIC7.38□□□□□ -1.23
Col1a1P11087 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col1a1P11087 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC7.38□□□□□ -1.23
Col1a1P11087 Gm26372-201ENSMUST00000157831 236 ntBASIC7.38□□□□□ -1.23
Col1a1P11087 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col1a1P11087 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC7.38□□□□□ -1.23
Col1a1P11087 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col1a1P11087 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC7.38□□□□□ -1.23
Col1a1P11087 Gm7890-201ENSMUST00000204877 601 ntBASIC7.38□□□□□ -1.23
Col1a1P11087 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col1a1P11087 Gm45874-201ENSMUST00000212423 346 ntBASIC7.38□□□□□ -1.23
Col1a1P11087 AC138284.5-201ENSMUST00000214389 652 ntBASIC7.38□□□□□ -1.23
Col1a1P11087 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC7.38□□□□□ -1.23
Col1a1P11087 AC153800.1-201ENSMUST00000219212 365 ntBASIC7.38□□□□□ -1.23
Col1a1P11087 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col1a1P11087 AC166358.3-201ENSMUST00000221456 181 ntBASIC7.38□□□□□ -1.23
Col1a1P11087 AC125543.4-201ENSMUST00000223385 117 ntBASIC7.38□□□□□ -1.23
Col1a1P11087 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col1a1P11087 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC7.38□□□□□ -1.23
Col1a1P11087 Mir7-2-201ENSMUST00000083675 97 ntBASIC7.38□□□□□ -1.23
Col1a1P11087 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Col1a1P11087 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Col1a1P11087 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col1a1P11087 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col1a1P11087 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col1a1P11087 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col1a1P11087 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col1a1P11087 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC7.38□□□□□ -1.23
Col1a1P11087 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Col1a1P11087 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Col1a1P11087 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col1a1P11087 Gm18880-201ENSMUST00000223333 1541 ntBASIC7.38□□□□□ -1.23
Col1a1P11087 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col1a1P11087 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
Col1a1P11087 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.38□□□□□ -1.23
Col1a1P11087 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC7.38□□□□□ -1.23
Col1a1P11087 Gm43873-201ENSMUST00000204505 3938 ntBASIC7.38□□□□□ -1.23
Col1a1P11087 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col1a1P11087 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 Gm13818-201ENSMUST00000119441 511 ntBASIC7.37□□□□□ -1.23
Col1a1P11087 Gm13533-201ENSMUST00000121104 177 ntBASIC7.37□□□□□ -1.23
Col1a1P11087 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC7.37□□□□□ -1.23
Col1a1P11087 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 Gm19231-201ENSMUST00000193212 830 ntBASIC7.37□□□□□ -1.23
Col1a1P11087 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC7.37□□□□□ -1.23
Col1a1P11087 Gm5306-201ENSMUST00000203325 757 ntBASIC7.37□□□□□ -1.23
Col1a1P11087 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC7.37□□□□□ -1.23
Col1a1P11087 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Col1a1P11087 Gm46192-201ENSMUST00000217894 326 ntBASIC7.37□□□□□ -1.23
Col1a1P11087 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col1a1P11087 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Col1a1P11087 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms