Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm37308-201ENSMUST00000194684 100 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Igkv15-101-201ENSMUST00000195917 299 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm6051-201ENSMUST00000201529 352 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm4822-201ENSMUST00000077551 479 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Snord66-201ENSMUST00000104051 75 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm12874-201ENSMUST00000117190 913 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm12884-201ENSMUST00000120371 325 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm16589-201ENSMUST00000159522 918 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Mir7014-201ENSMUST00000183853 63 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 AC129085.4-201ENSMUST00000224536 570 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Cdk12-202ENSMUST00000107538 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm13435-201ENSMUST00000120111 1023 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm7299-201ENSMUST00000194441 581 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Gm46327-201ENSMUST00000218240 365 ntBASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Col6a3E9PWQ3 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Gm9687-201ENSMUST00000189312 602 ntBASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Epb41-206ENSMUST00000105974 4844 ntTSL 5 BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Tbc1d24-203ENSMUST00000097376 7265 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Gm7731-201ENSMUST00000091759 470 ntBASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Gm43169-201ENSMUST00000199544 4734 ntBASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms