Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC8.1□□□□□ -1.11
Msh6P54276 Gm7146-201ENSMUST00000116079 739 ntBASIC8.1□□□□□ -1.11
Msh6P54276 Gm14294-201ENSMUST00000119749 751 ntBASIC8.1□□□□□ -1.11
Msh6P54276 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC8.1□□□□□ -1.11
Msh6P54276 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 Gm8454-201ENSMUST00000196980 811 ntBASIC8.1□□□□□ -1.11
Msh6P54276 Gm18290-201ENSMUST00000202900 844 ntBASIC8.1□□□□□ -1.11
Msh6P54276 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC8.1□□□□□ -1.11
Msh6P54276 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC8.1□□□□□ -1.11
Msh6P54276 Gm10688-201ENSMUST00000214985 520 ntBASIC8.1□□□□□ -1.11
Msh6P54276 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC8.1□□□□□ -1.11
Msh6P54276 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Msh6P54276 AC139568.1-201ENSMUST00000222878 486 ntBASIC8.1□□□□□ -1.11
Msh6P54276 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC8.1□□□□□ -1.11
Msh6P54276 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 Gm37100-201ENSMUST00000193344 1353 ntBASIC8.1□□□□□ -1.11
Msh6P54276 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Msh6P54276 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC8.1□□□□□ -1.11
Msh6P54276 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Msh6P54276 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC8.1□□□□□ -1.11
Msh6P54276 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Msh6P54276 Gm12874-201ENSMUST00000117190 913 ntBASIC8.1□□□□□ -1.11
Msh6P54276 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC8.1□□□□□ -1.11
Msh6P54276 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC8.1□□□□□ -1.11
Msh6P54276 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC8.1□□□□□ -1.11
Msh6P54276 Gm14457-201ENSMUST00000148069 1161 ntBASIC8.1□□□□□ -1.11
Msh6P54276 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC8.1□□□□□ -1.11
Msh6P54276 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 Gm8419-201ENSMUST00000189886 412 ntBASIC8.1□□□□□ -1.11
Msh6P54276 Gm6119-201ENSMUST00000193443 1206 ntBASIC8.1□□□□□ -1.11
Msh6P54276 Gm7626-201ENSMUST00000195801 353 ntBASIC8.1□□□□□ -1.11
Msh6P54276 Gm46223-201ENSMUST00000215196 675 ntBASIC8.1□□□□□ -1.11
Msh6P54276 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 Gm9292-201ENSMUST00000222008 710 ntBASIC8.1□□□□□ -1.11
Msh6P54276 AC165260.1-201ENSMUST00000224127 683 ntBASIC8.1□□□□□ -1.11
Msh6P54276 n-R5s89-201ENSMUST00000083532 104 ntBASIC8.1□□□□□ -1.11
Msh6P54276 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Msh6P54276 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Msh6P54276 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Msh6P54276 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Msh6P54276 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Msh6P54276 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC8.09□□□□□ -1.11
Msh6P54276 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Msh6P54276 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Msh6P54276 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Msh6P54276 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Msh6P54276 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Msh6P54276 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Msh6P54276 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Msh6P54276 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Msh6P54276 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Msh6P54276 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Msh6P54276 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Msh6P54276 Gm11984-201ENSMUST00000118142 766 ntBASIC8.09□□□□□ -1.12
Msh6P54276 Gm23995-201ENSMUST00000158060 129 ntBASIC8.09□□□□□ -1.12
Msh6P54276 Gm16269-201ENSMUST00000160532 409 ntBASIC8.09□□□□□ -1.12
Msh6P54276 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.12
Msh6P54276 Gm38131-201ENSMUST00000192449 430 ntBASIC8.09□□□□□ -1.12
Msh6P54276 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Msh6P54276 Gm44768-201ENSMUST00000205719 393 ntBASIC8.09□□□□□ -1.12
Msh6P54276 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC8.09□□□□□ -1.12
Msh6P54276 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC8.09□□□□□ -1.12
Msh6P54276 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC8.09□□□□□ -1.12
Msh6P54276 AC166105.1-201ENSMUST00000227512 482 ntBASIC8.09□□□□□ -1.12
Msh6P54276 Gm28392-201ENSMUST00000077630 393 ntBASIC8.09□□□□□ -1.12
Msh6P54276 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC8.09□□□□□ -1.12
Msh6P54276 AC183268.1-201ENSMUST00000215753 2837 ntBASIC8.09□□□□□ -1.12
Msh6P54276 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.12
Msh6P54276 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Msh6P54276 Gm28379-202ENSMUST00000187676 2896 ntBASIC8.08□□□□□ -1.12
Msh6P54276 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Msh6P54276 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
Msh6P54276 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Msh6P54276 Gm38142-201ENSMUST00000194093 3555 ntBASIC8.08□□□□□ -1.12
Msh6P54276 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Msh6P54276 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Msh6P54276 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.08□□□□□ -1.12
Msh6P54276 Wnk1-218ENSMUST00000161512 1426 ntBASIC8.08□□□□□ -1.12
Msh6P54276 Gm5949-201ENSMUST00000213468 1421 ntBASIC8.08□□□□□ -1.12
Msh6P54276 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Msh6P54276 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC8.08□□□□□ -1.12
Msh6P54276 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Msh6P54276 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC8.08□□□□□ -1.12
Msh6P54276 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Msh6P54276 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Msh6P54276 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms