Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm22273-201ENSMUST00000104040 132 ntBASIC9.45□□□□□ -0.9
Chd1P40201 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Chd1P40201 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Chd1P40201 Gm11545-201ENSMUST00000146507 375 ntBASIC9.45□□□□□ -0.9
Chd1P40201 Gm25057-201ENSMUST00000157366 88 ntBASIC9.45□□□□□ -0.9
Chd1P40201 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC9.45□□□□□ -0.9
Chd1P40201 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC9.45□□□□□ -0.9
Chd1P40201 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC9.45□□□□□ -0.9
Chd1P40201 AC123665.4-201ENSMUST00000228790 249 ntBASIC9.45□□□□□ -0.9
Chd1P40201 Gm22053-201ENSMUST00000083394 200 ntBASIC9.45□□□□□ -0.9
Chd1P40201 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd1P40201 Gm38451-201ENSMUST00000208329 2646 ntBASIC9.45□□□□□ -0.9
Chd1P40201 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Chd1P40201 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd1P40201 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd1P40201 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd1P40201 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd1P40201 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Chd1P40201 Gm42692-201ENSMUST00000199482 2833 ntBASIC9.44□□□□□ -0.9
Chd1P40201 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd1P40201 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Chd1P40201 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Chd1P40201 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Chd1P40201 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Chd1P40201 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Chd1P40201 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd1P40201 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Chd1P40201 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Chd1P40201 Gm25655-201ENSMUST00000158465 290 ntBASIC9.44□□□□□ -0.9
Chd1P40201 Mir6926-201ENSMUST00000184562 68 ntBASIC9.44□□□□□ -0.9
Chd1P40201 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC9.44□□□□□ -0.9
Chd1P40201 Gm2053-201ENSMUST00000195671 631 ntBASIC9.44□□□□□ -0.9
Chd1P40201 Gm8999-201ENSMUST00000204951 969 ntBASIC9.44□□□□□ -0.9
Chd1P40201 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC9.44□□□□□ -0.9
Chd1P40201 AC140288.1-201ENSMUST00000226329 503 ntBASIC9.44□□□□□ -0.9
Chd1P40201 AC156016.5-201ENSMUST00000228742 355 ntBASIC9.44□□□□□ -0.9
Chd1P40201 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Chd1P40201 Chordc1-201ENSMUST00000001825 5789 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd1P40201 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd1P40201 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Chd1P40201 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Chd1P40201 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Chd1P40201 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd1P40201 Gm7155-201ENSMUST00000121143 1671 ntBASIC9.44□□□□□ -0.9
Chd1P40201 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd1P40201 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Chd1P40201 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd1P40201 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chd1P40201 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd1P40201 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd1P40201 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Chd1P40201 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Chd1P40201 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Chd1P40201 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Chd1P40201 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd1P40201 Gm13077-201ENSMUST00000121941 484 ntBASIC9.43□□□□□ -0.9
Chd1P40201 Gm15335-201ENSMUST00000122442 411 ntBASIC9.43□□□□□ -0.9
Chd1P40201 Gm40692-201ENSMUST00000220411 491 ntBASIC9.43□□□□□ -0.9
Chd1P40201 Gm7557-201ENSMUST00000221935 865 ntBASIC9.43□□□□□ -0.9
Chd1P40201 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd1P40201 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chd1P40201 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chd1P40201 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chd1P40201 AC164883.2-201ENSMUST00000227931 3815 ntBASIC9.43□□□□□ -0.9
Chd1P40201 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chd1P40201 Pogz-204ENSMUST00000107269 5966 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Chd1P40201 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd1P40201 Gm14510-201ENSMUST00000116165 1092 ntBASIC9.42□□□□□ -0.9
Chd1P40201 Gm13738-201ENSMUST00000122437 469 ntBASIC9.42□□□□□ -0.9
Chd1P40201 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC9.42□□□□□ -0.9
Chd1P40201 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd1P40201 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Chd1P40201 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC9.42□□□□□ -0.9
Chd1P40201 Gm8141-201ENSMUST00000190856 1723 ntBASIC9.42□□□□□ -0.9
Chd1P40201 Gm37774-201ENSMUST00000194401 245 ntBASIC9.42□□□□□ -0.9
Chd1P40201 Gm18313-201ENSMUST00000221036 1784 ntBASIC9.42□□□□□ -0.9
Chd1P40201 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Chd1P40201 AC164295.2-201ENSMUST00000228539 757 ntBASIC9.42□□□□□ -0.9
Chd1P40201 Alkbh1-209ENSMUST00000162961 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd1P40201 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd1P40201 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Chd1P40201 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd1P40201 Gm20706-201ENSMUST00000175985 2023 ntBASIC9.42□□□□□ -0.9
Chd1P40201 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd1P40201 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd1P40201 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Chd1P40201 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd1P40201 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd1P40201 Gm36527-201ENSMUST00000195500 3029 ntBASIC9.42□□□□□ -0.9
Chd1P40201 AC167013.5-201ENSMUST00000227597 2947 ntBASIC9.42□□□□□ -0.9
Chd1P40201 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd1P40201 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC9.42□□□□□ -0.9
Chd1P40201 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
Chd1P40201 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Chd1P40201 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd1P40201 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Chd1P40201 Gm12303-201ENSMUST00000119506 673 ntBASIC9.42□□□□□ -0.9
Chd1P40201 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd1P40201 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC9.42□□□□□ -0.9
Chd1P40201 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms