Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm15260-201ENSMUST00000179402 883 ntBASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Mir6911-201ENSMUST00000184241 69 ntBASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm38283-201ENSMUST00000193041 695 ntBASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm18952-201ENSMUST00000194471 846 ntBASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm19030-201ENSMUST00000194947 552 ntBASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm3544-201ENSMUST00000196129 305 ntBASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 AC159297.2-201ENSMUST00000219567 1075 ntBASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 CT025667.1-201ENSMUST00000225872 382 ntBASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp40Q8BWR4 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Gm44417-201ENSMUST00000203298 3359 ntBASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Gm38124-201ENSMUST00000191710 2581 ntBASIC8.87□□□□□ -0.99
Usp40Q8BWR4 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Gm42885-201ENSMUST00000200763 4214 ntBASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Gm14173-201ENSMUST00000117690 278 ntBASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Gm8855-201ENSMUST00000118888 878 ntBASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Gm13604-201ENSMUST00000119332 482 ntBASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Gm14900-201ENSMUST00000120304 733 ntBASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Gm12618-201ENSMUST00000121754 483 ntBASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Gm25246-201ENSMUST00000175476 69 ntBASIC8.87□□□□□ -0.99
Usp40Q8BWR4 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Gm37770-201ENSMUST00000192855 772 ntBASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Gm18290-201ENSMUST00000202900 844 ntBASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Gm2225-201ENSMUST00000209570 377 ntBASIC8.87□□□□□ -0.99
Usp40Q8BWR4 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 CT009515.3-201ENSMUST00000226509 671 ntBASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Usp40Q8BWR4 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Gm45457-201ENSMUST00000209931 3089 ntBASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Gm23739-201ENSMUST00000102295 108 ntBASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Gm13114-201ENSMUST00000117605 106 ntBASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Gm14833-201ENSMUST00000118345 1027 ntBASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Gm8837-201ENSMUST00000161037 1107 ntBASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Gm27210-201ENSMUST00000184263 402 ntBASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Gm43596-201ENSMUST00000202818 884 ntBASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Gm44332-201ENSMUST00000203712 433 ntBASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Gm44681-201ENSMUST00000208447 842 ntBASIC8.86□□□□□ -0.99
Usp40Q8BWR4 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Gm7986-201ENSMUST00000221336 551 ntBASIC8.86□□□□□ -0.99
Usp40Q8BWR4 AV026068-216ENSMUST00000223874 328 ntBASIC8.86□□□□□ -0.99
Usp40Q8BWR4 AV026068-218ENSMUST00000223980 575 ntBASIC8.86□□□□□ -0.99
Usp40Q8BWR4 AC117949.2-201ENSMUST00000225900 584 ntBASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Usp40Q8BWR4 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms