Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lsm6P62313 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Lsm6P62313 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.61□□□□□ -1.51
Lsm6P62313 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm6P62313 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm6P62313 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm6P62313 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm6P62313 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC5.61□□□□□ -1.51
Lsm6P62313 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm6P62313 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Lsm6P62313 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Lsm6P62313 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
Lsm6P62313 Gm15789-201ENSMUST00000118992 1359 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 Gm23884-201ENSMUST00000122687 294 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 Gm23888-201ENSMUST00000122690 253 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC5.61□□□□□ -1.51
Lsm6P62313 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC5.61□□□□□ -1.51
Lsm6P62313 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm6P62313 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm6P62313 Gm23674-201ENSMUST00000157473 131 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 Gm26211-201ENSMUST00000158578 129 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 Gm25487-201ENSMUST00000158725 125 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm6P62313 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Lsm6P62313 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm6P62313 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC5.61□□□□□ -1.51
Lsm6P62313 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm6P62313 Gm10136-201ENSMUST00000183196 435 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 Gm27185-201ENSMUST00000184296 247 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 Gm27601-201ENSMUST00000184794 127 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC5.61□□□□□ -1.51
Lsm6P62313 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 Gm38068-201ENSMUST00000192546 540 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 Gm37770-201ENSMUST00000192855 772 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm6P62313 Gm43436-201ENSMUST00000199308 147 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.61□□□□□ -1.51
Lsm6P62313 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
Lsm6P62313 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Lsm6P62313 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Lsm6P62313 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC5.61□□□□□ -1.51
Lsm6P62313 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC5.61□□□□□ -1.51
Lsm6P62313 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 Gm9293-201ENSMUST00000223096 306 ntBASIC5.61□□□□□ -1.51
Lsm6P62313 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Lsm6P62313 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Lsm6P62313 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Lsm6P62313 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm6P62313 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Lsm6P62313 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm6P62313 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Lsm6P62313 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm6P62313 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm6P62313 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm6P62313 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Lsm6P62313 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Lsm6P62313 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm6P62313 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.6□□□□□ -1.51
Lsm6P62313 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
Lsm6P62313 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm6P62313 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm6P62313 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm6P62313 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm6P62313 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Lsm6P62313 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm6P62313 Gm14896-201ENSMUST00000121311 1351 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm6P62313 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5.6□□□□□ -1.51
Lsm6P62313 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm6P62313 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm6P62313 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm6P62313 Gm22103-201ENSMUST00000116733 121 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 Gm26475-201ENSMUST00000116769 121 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 Gm23620-201ENSMUST00000116812 121 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 Gm25042-201ENSMUST00000116856 121 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 Gm25540-201ENSMUST00000116880 121 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 Gm14356-201ENSMUST00000118322 869 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 Gm12040-201ENSMUST00000118357 537 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Lsm6P62313 Gm13740-201ENSMUST00000120590 310 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC5.6□□□□□ -1.51
Lsm6P62313 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm6P62313 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC5.6□□□□□ -1.51
Lsm6P62313 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm6P62313 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 Gm23550-201ENSMUST00000179003 121 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 Gm25123-201ENSMUST00000179154 121 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 Gm25353-201ENSMUST00000179366 121 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 Gm22992-201ENSMUST00000179496 121 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 Gm25892-201ENSMUST00000179867 121 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 Gm24092-201ENSMUST00000180257 121 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 Gm29784-201ENSMUST00000196217 406 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC5.6□□□□□ -1.51
Lsm6P62313 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.6□□□□□ -1.51
Lsm6P62313 Gm44252-201ENSMUST00000204187 330 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms