Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Shmt1P50431 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC7□□□□□ -1.29
Shmt1P50431 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC7□□□□□ -1.29
Shmt1P50431 Gm44538-201ENSMUST00000205615 348 ntBASIC7□□□□□ -1.29
Shmt1P50431 AC159476.2-201ENSMUST00000216221 418 ntBASIC7□□□□□ -1.29
Shmt1P50431 AC172989.1-201ENSMUST00000226387 513 ntBASIC7□□□□□ -1.29
Shmt1P50431 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC7□□□□□ -1.29
Shmt1P50431 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC7□□□□□ -1.29
Shmt1P50431 n-R5s56-201ENSMUST00000082521 105 ntBASIC7□□□□□ -1.29
Shmt1P50431 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Shmt1P50431 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Shmt1P50431 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC7□□□□□ -1.29
Shmt1P50431 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7□□□□□ -1.29
Shmt1P50431 Gm43176-201ENSMUST00000199653 2989 ntBASIC7□□□□□ -1.29
Shmt1P50431 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC7□□□□□ -1.29
Shmt1P50431 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Shmt1P50431 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Shmt1P50431 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC7□□□□□ -1.29
Shmt1P50431 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Shmt1P50431 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Shmt1P50431 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Shmt1P50431 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Shmt1P50431 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.99□□□□□ -1.29
Shmt1P50431 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Shmt1P50431 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
Shmt1P50431 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.99□□□□□ -1.29
Shmt1P50431 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 Gm13678-201ENSMUST00000118926 340 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 Gm5793-201ENSMUST00000119393 630 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.99□□□□□ -1.29
Shmt1P50431 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.99□□□□□ -1.29
Shmt1P50431 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Shmt1P50431 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.99□□□□□ -1.29
Shmt1P50431 Gm25675-201ENSMUST00000174979 118 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Shmt1P50431 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.99□□□□□ -1.29
Shmt1P50431 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC6.99□□□□□ -1.29
Shmt1P50431 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC6.99□□□□□ -1.29
Shmt1P50431 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC6.99□□□□□ -1.29
Shmt1P50431 Gm29664-201ENSMUST00000191125 463 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 Gm43160-201ENSMUST00000196453 421 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Shmt1P50431 Gm44162-201ENSMUST00000203543 544 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC6.99□□□□□ -1.29
Shmt1P50431 Gm18838-201ENSMUST00000204855 886 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 Gm10688-201ENSMUST00000214985 520 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 Gm18789-201ENSMUST00000216115 550 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 AC121986.1-201ENSMUST00000218588 781 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Shmt1P50431 AC123658.1-201ENSMUST00000228364 867 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Shmt1P50431 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Shmt1P50431 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Shmt1P50431 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Shmt1P50431 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.99□□□□□ -1.29
Shmt1P50431 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Shmt1P50431 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC6.99□□□□□ -1.29
Shmt1P50431 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Shmt1P50431 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Shmt1P50431 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Shmt1P50431 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Shmt1P50431 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Shmt1P50431 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Shmt1P50431 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Shmt1P50431 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.98□□□□□ -1.29
Shmt1P50431 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Shmt1P50431 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Shmt1P50431 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Shmt1P50431 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.98□□□□□ -1.29
Shmt1P50431 Gm6011-201ENSMUST00000211736 1796 ntBASIC6.98□□□□□ -1.29
Shmt1P50431 Mir708-201ENSMUST00000102189 109 ntBASIC6.98□□□□□ -1.29
Shmt1P50431 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Shmt1P50431 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Shmt1P50431 Gm15216-201ENSMUST00000118058 277 ntBASIC6.98□□□□□ -1.29
Shmt1P50431 Gm13455-201ENSMUST00000118767 517 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms