Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col1a1P11087 Gm21036-201ENSMUST00000207544 2611 ntBASIC7.44□□□□□ -1.22
Col1a1P11087 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col1a1P11087 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Col1a1P11087 Gm13137-201ENSMUST00000118035 345 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 Gm14000-201ENSMUST00000118670 233 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 Gm13991-201ENSMUST00000120190 648 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 M6pr-ps-201ENSMUST00000120481 830 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 Gm12181-201ENSMUST00000121448 531 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Col1a1P11087 Gm22094-201ENSMUST00000158976 117 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Col1a1P11087 Gm37265-201ENSMUST00000191698 885 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 Gm37196-201ENSMUST00000194762 906 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 Gm8454-201ENSMUST00000196980 811 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 Gm9480-201ENSMUST00000198038 616 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 Gm44382-201ENSMUST00000198683 122 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC7.43□□□□□ -1.22
Col1a1P11087 AC112956.1-201ENSMUST00000213563 492 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC7.43□□□□□ -1.22
Col1a1P11087 AC134254.2-201ENSMUST00000221262 170 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col1a1P11087 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Col1a1P11087 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Col1a1P11087 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Col1a1P11087 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col1a1P11087 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Col1a1P11087 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col1a1P11087 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col1a1P11087 Gm38077-201ENSMUST00000193657 3245 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Col1a1P11087 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Col1a1P11087 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC7.43□□□□□ -1.22
Col1a1P11087 Gm37420-201ENSMUST00000195332 2912 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC7.43□□□□□ -1.22
Col1a1P11087 Gm38124-201ENSMUST00000191710 2581 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col1a1P11087 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col1a1P11087 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col1a1P11087 AC125328.1-201ENSMUST00000226812 2265 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col1a1P11087 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Col1a1P11087 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Col1a1P11087 Gm12399-201ENSMUST00000121475 446 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC7.43□□□□□ -1.22
Col1a1P11087 Gm23250-201ENSMUST00000157444 267 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 Mir5125-201ENSMUST00000175240 79 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC7.43□□□□□ -1.22
Col1a1P11087 Gm28665-201ENSMUST00000189269 670 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC7.43□□□□□ -1.22
Col1a1P11087 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC7.43□□□□□ -1.22
Col1a1P11087 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Col1a1P11087 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col1a1P11087 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col1a1P11087 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC7.42□□□□□ -1.22
Col1a1P11087 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col1a1P11087 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col1a1P11087 AC165260.6-204ENSMUST00000225571 3508 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col1a1P11087 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col1a1P11087 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col1a1P11087 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col1a1P11087 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col1a1P11087 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col1a1P11087 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Col1a1P11087 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col1a1P11087 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
Col1a1P11087 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col1a1P11087 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Col1a1P11087 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col1a1P11087 Gm3943-201ENSMUST00000118606 718 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col1a1P11087 Gm28943-201ENSMUST00000186187 615 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Gm28736-201ENSMUST00000186257 615 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Gm29401-201ENSMUST00000186690 615 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Gm29178-204ENSMUST00000186784 615 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Gm28589-201ENSMUST00000186991 615 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Gm28936-201ENSMUST00000187153 615 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Gm29121-201ENSMUST00000187611 615 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Gm28243-201ENSMUST00000187801 615 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Gm28844-202ENSMUST00000187977 615 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Gm29058-201ENSMUST00000189510 615 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Gm29624-201ENSMUST00000190018 615 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Gm28780-201ENSMUST00000190223 615 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Gm28969-211ENSMUST00000190992 615 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Gm28990-207ENSMUST00000191219 615 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Gm36468-201ENSMUST00000192119 615 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Gm31572-201ENSMUST00000193341 615 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Gm30175-201ENSMUST00000194173 615 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Gm30858-201ENSMUST00000195516 615 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 AC167222.2-201ENSMUST00000220014 295 ntBASIC7.42□□□□□ -1.22
Col1a1P11087 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Col1a1P11087 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC7.42□□□□□ -1.22
Col1a1P11087 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col1a1P11087 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col1a1P11087 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms